RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CPNE9Q8IYJ1 553 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 CHST13Q8NET6 341 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 IPMKQ8NFU5 416 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 NXNL1Q96CM4 212 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 SMARCAD1Q9H4L7 1026 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 ATXN10Q9UBB4 475 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 AURKCQ9UQB9 309 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 CDYLQ9Y232 598 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 C9IYK1 514 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 FAM58BPP0C7Q3 252 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 ZFXP17010 805 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 HARS2P49590 506 aaKnown RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 RPL14P50914 215 aaKnown RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 GJA9P57773 515 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 KCTD2Q14681 263 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 RYBPQ8N488 228 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 DRAXINQ8NBI3 349 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 PDCD6IPQ8WUM4 868 aaKnown RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 PRICKLE1Q96MT3 831 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-202ENST00000339570 OSMRQ99650 979 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 CPNE1Q99829 537 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 COQ10BQ9H8M1 238 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 MKS1Q9NXB0 559 aa16.41■□□□□ 0.22
SCARB1-202ENST00000339570 DFFAO00273 331 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 SUPT3HO75486 399 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 ADGRE1Q14246 886 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 GEN1Q17RS7 908 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 NOMO2Q5JPE7 1267 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 B3GNT6Q6ZMB0 384 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 TMEM110Q86TL2 294 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 HSPBAP1Q96EW2 488 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 LRRC40Q9H9A6 602 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 CDHR5Q9HBB8 845 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 LRRC4Q9HBW1 653 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 PIGVQ9NUD9 493 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 GIMAP2Q9UG22 337 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 SFMBT1Q9UHJ3 866 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 HDAC3O15379 428 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 HBP1O60381 514 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 CLIC3O95833 236 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 ME2P23368 584 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 PCSK7Q16549 785 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 GRTP1Q5TC63 336 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 OGFRL1Q5TC84 451 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-202ENST00000339570 POTEAQ6S8J7 498 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 C16orf89Q6UX73 402 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 FSTL5Q8N475 847 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-202ENST00000339570 RNF169Q8NCN4 708 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 ACMSDQ8TDX5 336 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
SCARB1-202ENST00000339570 GJD2Q9UKL4 321 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 ADAMTS5Q9UNA0 930 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 LAMA3Q16787 3333 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 SPTLC1O15269 473 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 C22orf31O95567 290 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 ATICP31939 592 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 LIMK2P53671 638 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 AGKQ53H12 422 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 LBX2Q6XYB7 198 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 PIF1Q9H611 641 aa16.4■□□□□ 0.22
SCARB1-202ENST00000339570 COPG1Q9Y678 874 aaKnown RBP16.4■□□□□ 0.22
SCARB1-202ENST00000339570 ZNF839A8K0R7 811 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 PMPCBO75439 489 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 TIPRLO75663 272 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 MCF2P10911 925 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 PSMC3P17980 439 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 NR2C2P49116 596 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 TPI1P60174 286 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 TNFAIP2Q03169 654 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ZBTB17Q13105 803 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 CSHL1Q14406 222 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 PRPSAP1Q14558 356 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 CCDC153Q494R4 210 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 LDB1Q86U70 411 aaPredicted RBP16.39■□□□□ 0.21
SCARB1-202ENST00000339570 IFNEQ86WN2 208 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 SIX6OS1Q8N1H7 587 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ELMO2Q96JJ3 720 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 HAPLN3Q96S86 360 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ASB7Q9H672 318 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 SETD4Q9NVD3 440 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 NUDT5Q9UKK9 219 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ZNF711Q9Y462 761 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 TSPAN1O60635 241 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 MT-ND1P03886 318 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 BST2Q10589 180 aaKnown RBP16.39■□□□□ 0.21
SCARB1-202ENST00000339570 LAMC2Q13753 1193 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 NPWQ8N729 165 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ZDHHC7Q9NXF8 308 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 SLC2A6Q9UGQ3 507 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 SHROOM3Q8TF72 1996 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ZNF638Q14966 1978 aaKnown RBP16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ARHGEF37A1IGU5 675 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 TMX2-CTNND1H3BSU7 103 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 PLOD2O00469 737 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 AURKAO14965 403 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 ALDH1A2O94788 518 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 PTPN3P26045 913 aa16.39■□□□□ 0.21
SCARB1-202ENST00000339570 INCA1Q0VD86 236 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms