RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 COX16Q9P0S2 106 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 VANGL2Q9ULK5 521 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 HS3ST2Q9Y278 367 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-202ENST00000338325 ATP6V1DQ9Y5K8 247 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 OR51B4Q9Y5P0 310 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 LY6G6EA0A0G2JKS1 128 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 NEMP2A6NFY4 417 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 KPNA3O00505 521 aaPredicted RBP11.78□□□□□ -0.52
CSMD2-202ENST00000338325 CLDN11O75508 207 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 LETM1O95202 739 aaPredicted RBP11.78□□□□□ -0.52
CSMD2-202ENST00000338325 SRCP12931 536 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 CHRNA3P32297 505 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 MTA1Q13330 715 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 PDCLQ13371 301 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 STIM1Q13586 685 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 AUHQ13825 339 aaKnown RBP11.78□□□□□ -0.52
CSMD2-202ENST00000338325 TAF5Q15542 800 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 GCNT7Q6ZNI0 430 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 ABI3BPQ7Z7G0 1075 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
CSMD2-202ENST00000338325 SLC22A18ASQ8N1D0 253 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 FAM181AQ8N9Y4 354 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 EHBP1Q8NDI1 1231 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 SPATA20Q8TB22 786 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 FAM174AQ8TBP5 190 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF606Q8WXB4 792 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 ARRDC3Q96B67 414 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 NOX5Q96PH1 765 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 SLC2A13Q96QE2 648 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 DUSP23Q9BVJ7 150 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 DPH1Q9BZG8 443 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 MUC3BQ9H195 1237 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 GDPD2Q9HCC8 539 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 ASCL3Q9NQ33 180 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 DYRK4Q9NR20 520 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 THSD1Q9NS62 852 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 U3KQA8 63 aa11.78□□□□□ -0.52
CSMD2-202ENST00000338325 A6NNZ2 444 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 SCAMP1O15126 338 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 KLK10O43240 276 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 THAP12O43422 761 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 LZTS3O60299 673 aaPredicted RBP11.77□□□□□ -0.52
CSMD2-202ENST00000338325 GLI1P08151 1106 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 MYF5P13349 255 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 GNA15P30679 374 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 CDH4P55283 916 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 CLDN2P57739 230 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 HNRNPKP61978 463 aaKnown RBP eCLIP11.77□□□□□ -0.52
CSMD2-202ENST00000338325 KRT83P78385 493 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 PTAR1Q7Z6K3 402 aaPredicted RBP11.77□□□□□ -0.52
CSMD2-202ENST00000338325 DCP2Q8IU60 420 aaKnown RBP11.77□□□□□ -0.52
CSMD2-202ENST00000338325 DEFB106AQ8N104 65 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 ATP11CQ8NB49 1132 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 TMIEQ8NEW7 156 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 OR2A12Q8NGT7 310 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 IFI44Q8TCB0 444 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 MAPK15Q8TD08 544 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 DHTKD1Q96HY7 919 aaPredicted RBP11.77□□□□□ -0.52
CSMD2-202ENST00000338325 VCPIP1Q96JH7 1222 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 INTS2Q9H0H0 1204 aaKnown RBP11.77□□□□□ -0.52
CSMD2-202ENST00000338325 ABCG4Q9H172 646 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 CAAP1Q9H8G2 361 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 ASNSD1Q9NWL6 643 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 DNAJC28Q9NX36 388 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 ZFR2Q9UPR6 939 aaKnown RBP11.77□□□□□ -0.52
CSMD2-202ENST00000338325 TBC1D30Q9Y2I9 924 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 DOCK4Q8N1I0 1966 aa11.77□□□□□ -0.52
CSMD2-202ENST00000338325 K7ESM1 405 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 HSF2BPO75031 334 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 NEBLO76041 1014 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 PCDH8O95206 1070 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 MT-CO1P00395 513 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 PRNPP04156 253 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 GGCXP38435 758 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 PPP1R2P41236 205 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 C5orf22Q49AR2 442 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 TMEM259Q4ZIN3 620 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 C3orf38Q5JPI3 329 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 EFHC1Q5JVL4 640 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 SEL1L3Q68CR1 1132 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 OR6B2Q6IFH4 312 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 Q6ZSR6 202 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 ERN2Q76MJ5 926 aaKnown RBP11.76□□□□□ -0.53
CSMD2-202ENST00000338325 SNRNP27Q8WVK2 155 aaKnown RBP11.76□□□□□ -0.53
CSMD2-202ENST00000338325 TTC9Q92623 222 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 PPP1R16AQ96I34 528 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 PSMB7Q99436 277 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 C2orf49Q9BVC5 232 aaPredicted RBP11.76□□□□□ -0.53
CSMD2-202ENST00000338325 SEMA4CQ9C0C4 833 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 OSBPL2Q9H1P3 480 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 GPR27Q9NS67 375 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 VPS51Q9UID3 782 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 SATB2Q9UPW6 733 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 MYO18BQ8IUG5 2567 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 H3BM21 787 aa11.76□□□□□ -0.53
CSMD2-202ENST00000338325 K7ERQ8 282 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms