RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CDRT15Q96T59 188 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 SORT1Q99523 831 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 NFKBIZQ9BYH8 718 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 GRIP2Q9C0E4 1043 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CDHR5Q9HBB8 845 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 FZD10Q9ULW2 581 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 UBQLN1Q9UMX0 589 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CAPN8A6NHC0 703 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 TRPA1O75762 1119 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 AMHP03971 560 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 ATP5BP06576 529 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 SRGAP2BP0DMP2 458 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 ITGAXP20702 1163 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 MPSTP25325 297 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 ARRB2P32121 409 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 TKTL1P51854 596 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 NIPAL4Q0D2K0 466 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 FER1L6Q2WGJ9 1857 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 DCAF4L1Q3SXM0 396 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CCDC153Q494R4 210 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 NOTUMQ6P988 496 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 STRADAQ7RTN6 431 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 KCNMB4Q86W47 210 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 EDEM1Q92611 657 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 DDIT4Q9NX09 232 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 SELENONQ9NZV5 590 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 TK2O00142 265 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 ZBTB24O43167 697 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 FOXD2O60548 495 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CNMDO75829 334 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 GSRP00390 522 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 LTFP02788 710 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 MRPS22P82650 360 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 DLG1Q12959 904 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 SPANXN3Q5MJ09 141 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 SLC2A7Q6PXP3 512 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 ZBTB46Q86UZ6 589 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 RNF135Q8IUD6 432 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 NDEL1Q9GZM8 345 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 CACNG4Q9UBN1 327 aa16.81■□□□□ 0.28
CDC42EP4-201ENST00000335793 TOMM70O94826 608 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 PCSK6P29122 969 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 CRABP2P29373 138 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 TAF6P49848 677 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 CCNA1P78396 465 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 CNGA3Q16281 694 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 AAGABQ6PD74 315 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 PSTKQ8IV42 348 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 NCSTNQ92542 709 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 SERPINI1Q99574 410 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 CDH19Q9H159 772 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 RUVBL2Q9Y230 463 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 INPP5FQ9Y2H2 1132 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 DTNAQ9Y4J8 743 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 PPP2R3BQ9Y5P8 575 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 SCN1AP35498 2009 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 ZBTB14O43829 449 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 PIGNO95427 931 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 VCLP18206 1134 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 TMED10P49755 219 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 CCNIQ14094 377 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 FLOT2Q14254 428 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 PPM1LQ5SGD2 360 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 MAP3K21Q5TCX8 1036 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 NAPRTQ6XQN6 538 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 ATG14Q6ZNE5 492 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 HFE2Q6ZVN8 426 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 IFNLR1Q8IU57 520 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 FBXW8Q8N3Y1 598 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 MAPK15Q8TD08 544 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 GATA5Q9BWX5 397 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 SNX10Q9Y5X0 201 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 MCM3APO60318 1980 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 FAM72CH0Y354 149 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 ALDH1A2O94788 518 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 TKTP29401 623 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 DCTN2Q13561 401 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 ANKRD20A4Q4UJ75 823 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 FAM72AQ5TYM5 149 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 THOC7Q6I9Y2 204 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 FAM72DQ6L9T8 149 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 ACAD11Q709F0 780 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 FAM72BQ86X60 149 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 ANKRD13AQ8IZ07 590 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 OR6J1Q8NGC5 347 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 HSFY1Q96LI6 401 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 ZNF560Q96MR9 790 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 RBBP8Q99708 897 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 OMDQ99983 421 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 RNF39Q9H2S5 420 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 MROH8Q9H579 483 aa16.8■□□□□ 0.28
CDC42EP4-201ENST00000335793 EIF3FO00303 357 aaPredicted RBP16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 BEST1O76090 585 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 NOS2P35228 1153 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 POU5F1BQ06416 359 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 TUBB3Q13509 450 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 TMEM198Q66K66 360 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 SEL1L3Q68CR1 1132 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms