RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZMYND11Q15326 602 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TCEA2Q15560 299 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 PAMR1Q6UXH9 720 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SNX32Q86XE0 403 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 MCFD2Q8NI22 146 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GPRASP2Q96D09 838 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TCEAL7Q9BRU2 100 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 SLC7A5P2Q9GIP4 190 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TRIT1Q9H3H1 467 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 EPB41L1Q9H4G0 881 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 TRMT13Q9NUP7 481 aaKnown RBP5.6□□□□□ -1.51
PTPRB-202ENST00000334414 VPS4AQ9UN37 437 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 ABCG2Q9UNQ0 655 aa5.6□□□□□ -1.51
PTPRB-202ENST00000334414 GSTM1P09488 218 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 CES1P23141 567 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 NTSP30990 170 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 GPR15P49685 360 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 IST1P53990 364 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 BTN3A2P78410 334 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 GOLGA7BQ2TAP0 167 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 DPF3Q92784 378 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 KIF12Q96FN5 646 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 CRB1P82279 1406 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PGRMC2O15173 223 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PLOD3O60568 738 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SLC9A3P48764 834 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 CENPAP49450 140 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ALDH3A2P51648 485 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 CDK18Q07002 472 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 LLGL1Q15334 1064 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 GLRA4Q5JXX5 417 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PYHIN1Q6K0P9 492 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 NKAPQ8N5F7 415 aaKnown RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SPATA33Q96N06 139 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 KBTBD4Q9NVX7 518 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 DIP2AQ14689 1571 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PDCD5O14737 125 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 YES1P07947 543 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SNRPB2P08579 225 aaKnown RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 CXCR2P25025 360 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 TWF1Q12792 350 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 HIPK1Q86Z02 1210 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SIRT2Q8IXJ6 389 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 OFCC1Q8IZS5 231 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 C10orf53Q8N6V4 93 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PABPC5Q96DU9 382 aaKnown RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PPP3R2Q96LZ3 170 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF608Q9ULD9 1512 aaPredicted RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ZNF451Q9Y4E5 1061 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 H7C4K7 107 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 KCNK1O00180 336 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ADAMDEC1O15204 470 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 MAPK8P45983 427 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ARL4DP49703 201 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 TAF6P49848 677 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PHC1P78364 1004 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 IL18Q14116 193 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ACCSLQ4AC99 568 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 GPAT2Q6NUI2 795 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 LRRC69Q6ZNQ3 347 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 MPP5Q8N3R9 675 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PIH1D2Q8WWB5 315 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PRCCQ92733 491 aaPredicted RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SEPHS2Q99611 448 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PHB2Q99623 299 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 TTYH1Q9H313 450 aaPredicted RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 LRRC19Q9H756 370 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PROCP04070 461 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 IL18R1Q13478 541 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 HSD17B12Q53GQ0 312 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 EGFL6Q8IUX8 553 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PYDC1Q8WXC3 89 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 POMKQ9H5K3 350 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 NECTIN3Q9NQS3 549 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 TLL2Q9Y6L7 1015 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 FAM196BA6NMK8 535 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 A1BGP04217 495 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PAEPP09466 180 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 HPGDP15428 266 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 CYP2C18P33260 490 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 TAF5Q15542 800 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ERAP2Q6P179 960 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 RIT1Q92963 219 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 ITCHQ96J02 903 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SIK2Q9H0K1 926 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 S100A14Q9HCY8 104 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 GGA3Q9NZ52 723 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 LIMD1Q9UGP4 676 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 GRIP1Q9Y3R0 1128 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 LOC100506127A0A0U1RQW1 187 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 AP3D1O14617 1153 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 RPLP0P05388 317 aaKnown RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 PGRP06401 933 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SLC16A2P36021 539 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SCNN1DP51172 638 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 DYNLL1P63167 89 aaKnown RBP5.59□□□□□ -1.51
PTPRB-202ENST00000334414 OR8H3Q8N146 312 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 TMEM9Q9P0T7 183 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 SPEF1Q9Y4P9 236 aa5.59□□□□□ -1.51
PTPRB-202ENST00000334414 CAPN6Q9Y6Q1 641 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms