RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 TRIM66O15016 1216 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 NARSO43776 548 aaKnown RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ZBTB14O43829 449 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PPIL2Q13356 520 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 DDR2Q16832 855 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PMF1Q6P1K2 205 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 COQ8AQ8NI60 647 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 PLEKHA1Q9HB21 404 aa12.85□□□□□ -0.35
KPNA4-201ENST00000334256 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
KPNA4-201ENST00000334256 ATP5JP18859 108 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ADD2P35612 726 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 S100ZQ8WXG8 99 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 RPA1P27694 616 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 PSEN1P49768 467 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 TBX4P57082 545 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 DNASE1L3Q13609 305 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 C1orf189Q5VU69 101 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 SNX20Q7Z614 316 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 UTYO14607 1347 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ABCC12Q96J65 1359 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 LAMTOR5O43504 91 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 OMPP47874 163 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 HSPA14Q0VDF9 509 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ALG1LQ6GMV1 187 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 TSTD1Q8NFU3 115 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 OGDHLQ9ULD0 1010 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 NTRK1P04629 796 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ATF4P18848 351 aaPredicted RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 PERM1Q5SV97 790 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 MTDHQ86UE4 582 aaKnown RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ASB12Q8WXK4 309 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 C9orf72Q96LT7 481 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 TMEM79Q9BSE2 394 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 WRAP53Q9BUR4 548 aaKnown RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 CXorf56Q9H5V9 222 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 DNAJA1P31689 397 aaKnown RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 PRCPP42785 496 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 NAIF1Q69YI7 327 aaPredicted RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 GDF6Q6KF10 455 aaPredicted RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 TTI2Q6NXR4 508 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 KLHL35Q6PF15 583 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 PHYKPLQ8IUZ5 450 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 TMEM156Q8N614 296 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 RASSF5Q8WWW0 418 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ATAD3AQ9NVI7 634 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 GPRC5DQ9NZD1 345 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ADGRG1Q9Y653 693 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 SIN3BO75182 1162 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 SLFNL1Q499Z3 407 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 XKR3Q5GH77 459 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ZSWIM2Q8NEG5 633 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 OR6K2Q8NGY2 324 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 SEMA6AQ9H2E6 1030 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ZNF214Q9UL59 606 aaPredicted RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 LYSMD3Q7Z3D4 306 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 GPR156Q8NFN8 814 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 LINGO1Q96FE5 620 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 CEP41Q9BYV8 373 aa12.84□□□□□ -0.35
KPNA4-201ENST00000334256 RUVBL1Q9Y265 456 aaKnown RBP12.84□□□□□ -0.35
KPNA4-201ENST00000334256 ZSCAN5BA6NJL1 495 aa12.83□□□□□ -0.35
KPNA4-201ENST00000334256 FAM83EQ2M2I3 478 aa12.83□□□□□ -0.35
KPNA4-201ENST00000334256 PLCZ1Q86YW0 608 aa12.83□□□□□ -0.35
KPNA4-201ENST00000334256 CKAP2Q8WWK9 683 aa12.83□□□□□ -0.35
KPNA4-201ENST00000334256 SOCS4Q8WXH5 440 aa12.83□□□□□ -0.35
KPNA4-201ENST00000334256 MFSD3Q96ES6 412 aa12.83□□□□□ -0.35
KPNA4-201ENST00000334256 LRFN1Q9P244 771 aa12.83□□□□□ -0.35
KPNA4-201ENST00000334256 EFCAB10A6NFE3 127 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PNMA6AP0CW24 399 aaPredicted RBP12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PSMD4P55036 377 aaKnown RBP12.83□□□□□ -0.36
KPNA4-201ENST00000334256 KANSL1Q7Z3B3 1105 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 DEPDC4Q8N2C3 294 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 KAT2AQ92830 837 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 NDST4Q9H3R1 872 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 USP20Q9Y2K6 914 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PMF1-BGLAPU3KQ54 211 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 SEPHS1P49903 392 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 AP2S1P53680 142 aaPredicted RBP12.83□□□□□ -0.36
KPNA4-201ENST00000334256 TMEM47Q9BQJ4 181 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 TMEM117Q9H0C3 514 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 TMEM165Q9HC07 324 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 MGAT4AQ9UM21 535 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PPM1BO75688 479 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
KPNA4-201ENST00000334256 CD53P19397 219 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 AHCYP23526 432 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 FSHRP23945 695 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 MCAMP43121 646 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PTK7Q13308 1070 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PDCD4Q53EL6 469 aaKnown RBP12.83□□□□□ -0.36
KPNA4-201ENST00000334256 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
KPNA4-201ENST00000334256 PANX2Q96RD6 677 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms