RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 MAGEH1Q9H213 219 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 SEMA4AQ9H3S1 761 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 PDFQ9HBH1 243 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 ACTL7AQ9Y615 435 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 MTCH2Q9Y6C9 303 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 TRIOBPQ9H2D6 2365 aa23.73■■□□□ 1.39
TSEN54-201ENST00000333213 ILVBLA1L0T0 632 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 LUC7L3O95232 432 aaKnown RBP23.72■■□□□ 1.39
TSEN54-201ENST00000333213 TCF3P15923 654 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 SLC10A7Q0GE19 358 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 MSS51Q4VC12 460 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 EMC10Q5UCC4 262 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 DDI1Q8WTU0 396 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 FATE1Q969F0 183 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 RBM15Q96T37 977 aaKnown RBP eCLIP23.72■■□□□ 1.39
TSEN54-201ENST00000333213 LMCD1Q9NZU5 365 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 TRHDEQ9UKU6 1024 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 BANF1O75531 89 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 ZNF189O75820 626 aaPredicted RBP23.72■■□□□ 1.39
TSEN54-201ENST00000333213 RHOCP08134 193 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 NFKB1P19838 968 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 GRIA1P42261 906 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 CTC1Q2NKJ3 1217 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 FYB2Q5VWT5 728 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 RNF43Q68DV7 783 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 FOXR1Q6PIV2 292 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 ZNF534Q76KX8 674 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 GET4Q7L5D6 327 aaPredicted RBP23.72■■□□□ 1.39
TSEN54-201ENST00000333213 OTOP3Q7RTS5 596 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 ZNF354CQ86Y25 554 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 TMEM25Q86YD3 366 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 PDCD7Q8N8D1 485 aaKnown RBP23.72■■□□□ 1.39
TSEN54-201ENST00000333213 ST13P5Q8NFI4 369 aaPredicted RBP23.72■■□□□ 1.39
TSEN54-201ENST00000333213 CAPS2Q9BXY5 557 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 GBA3Q9H227 469 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 S1PR5Q9H228 398 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 RSPH14Q9UHP6 348 aa23.72■■□□□ 1.39
TSEN54-201ENST00000333213 H0Y626 953 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 CACNG3O60359 315 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 PRAMEF11O60813 436 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 HLA-DQB2P05538 268 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 MZF1P28698 734 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 FDFT1P37268 417 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 VIPR2P41587 438 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 PMS2P54278 862 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 IL10RBQ08334 325 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 HNRNPDQ14103 355 aaKnown RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 FASTKD3Q14CZ7 662 aaKnown RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 FAM78AQ5JUQ0 283 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 RNF219Q5W0B1 726 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 PABPC5Q96DU9 382 aaKnown RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 ASB16Q96NS5 453 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 WDR83Q9BRX9 315 aaKnown RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 ACE2Q9BYF1 805 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 SP110Q9HB58 689 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 RBM22Q9NW64 420 aaKnown RBP eCLIP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 NUP210Q8TEM1 1887 aaPredicted RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 AVILO75366 819 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 WEE1P30291 646 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 MPPE1Q53F39 396 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 MPP7Q5T2T1 576 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 IL31Q6EBC2 164 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 CAND1Q86VP6 1230 aaKnown RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 C10orf67Q8IYJ2 551 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 AGGF1Q8N302 714 aaeCLIP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 ALG14Q96F25 216 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 CDC42EP4Q9H3Q1 356 aaKnown RBP23.71■■□□□ 1.39
TSEN54-201ENST00000333213 OR51B4Q9Y5P0 310 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 WNT6Q9Y6F9 365 aa23.71■■□□□ 1.39
TSEN54-201ENST00000333213 NDC80O14777 642 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 TPSB2P20231 275 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 LTBRP36941 435 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 OLIG2Q13516 323 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 SLMAPQ14BN4 828 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 TPSAB1Q15661 275 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 HP1BP3Q5SSJ5 553 aaPredicted RBP23.7■■□□□ 1.38
TSEN54-201ENST00000333213 ADGRG2Q8IZP9 1017 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 IQCKQ8N0W5 287 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.7■■□□□ 1.38
TSEN54-201ENST00000333213 TEX26Q8N6G2 289 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 CELF5Q8N6W0 485 aaKnown RBP23.7■■□□□ 1.38
TSEN54-201ENST00000333213 SERPINB12Q96P63 405 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 SPON2Q9BUD6 331 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 MLPHQ9BV36 600 aaPredicted RBP23.7■■□□□ 1.38
TSEN54-201ENST00000333213 FOXP3Q9BZS1 431 aa23.7■■□□□ 1.38
TSEN54-201ENST00000333213 MYOFQ9NZM1 2061 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 TYW5A2RUC4 315 aaKnown RBP23.69■■□□□ 1.38
TSEN54-201ENST00000333213 SMAPO00193 183 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 EIF3HO15372 352 aaKnown RBP eCLIP23.69■■□□□ 1.38
TSEN54-201ENST00000333213 HIF1AQ16665 826 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 RELL1Q8IUW5 271 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 PGBD5Q8N414 524 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 OXNAD1Q96HP4 312 aaPredicted RBP23.69■■□□□ 1.38
TSEN54-201ENST00000333213 FEM1AQ9BSK4 669 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 ATP13A1Q9HD20 1204 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 KDELR3O43731 214 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 HOXB8P17481 243 aaPredicted RBP23.69■■□□□ 1.38
TSEN54-201ENST00000333213 CDH18Q13634 790 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 ANO4Q32M45 955 aa23.69■■□□□ 1.38
TSEN54-201ENST00000333213 MARC1Q5VT66 337 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms