RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 RASA4BC9J798 803 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 DCLK1O15075 740 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 RASA4O43374 803 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 SNAP91O60641 907 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 KRT1P04264 644 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 TNNT1P13805 278 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 PXNP49023 591 aaPredicted RBP20.96■□□□□ 0.95
MRPL40-201ENST00000333130 CAMK2GQ13555 558 aaPredicted RBP20.96■□□□□ 0.95
MRPL40-201ENST00000333130 TAZQ16635 292 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 USP39Q53GS9 565 aaKnown RBP20.96■□□□□ 0.95
MRPL40-201ENST00000333130 SH2D3CQ8N5H7 860 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 ZNF366Q8N895 744 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 OR2T3Q8NH03 318 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 NELL1Q92832 810 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 MYO19Q96H55 970 aa20.96■□□□□ 0.95
MRPL40-201ENST00000333130 ACE2Q9BYF1 805 aaPredicted RBP20.96■□□□□ 0.95
MRPL40-201ENST00000333130 ATP9BO43861 1147 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 ACADMP11310 421 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 ACVRL1P37023 503 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 RECQLP46063 649 aaPredicted RBP20.95■□□□□ 0.94
MRPL40-201ENST00000333130 MMRN1Q13201 1228 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 ANKRD20A8PQ5CZ79 823 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 MEI1Q5TIA1 1274 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 KIAA1211LQ6NV74 962 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 DSG4Q86SJ6 1040 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 C11orf74Q86VG3 221 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 ZBTB44Q8NCP5 570 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 EXD1Q8NHP7 514 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 ALG3Q92685 438 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 PRCCQ92733 491 aaPredicted RBP20.95■□□□□ 0.94
MRPL40-201ENST00000333130 KLC2Q9H0B6 622 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 NOL6Q9H6R4 1146 aaKnown RBP20.95■□□□□ 0.94
MRPL40-201ENST00000333130 PRDM16Q9HAZ2 1276 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 SLCO3A1Q9UIG8 710 aa20.95■□□□□ 0.94
MRPL40-201ENST00000333130 PLXND1Q9Y4D7 1925 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 TTC34A8MYJ7 566 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 DDX3YO15523 660 aaKnown RBP20.94■□□□□ 0.94
MRPL40-201ENST00000333130 KDELR3O43731 214 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 ZNF217O75362 1048 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 GABRG2P18507 467 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 SERPINH1P50454 418 aaKnown RBP20.94■□□□□ 0.94
MRPL40-201ENST00000333130 SFSWAPQ12872 951 aaKnown RBP20.94■□□□□ 0.94
MRPL40-201ENST00000333130 DLG2Q15700 870 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 KIAA1324Q6UXG2 1013 aaKnown RBP20.94■□□□□ 0.94
MRPL40-201ENST00000333130 PCDH19Q8TAB3 1148 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.94■□□□□ 0.94
MRPL40-201ENST00000333130 CASKIN2Q8WXE0 1202 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 ERLEC1Q96DZ1 483 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 HMCESQ96FZ2 354 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 MAK16Q9BXY0 300 aaKnown RBP20.94■□□□□ 0.94
MRPL40-201ENST00000333130 TPSD1Q9BZJ3 242 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 CEP44Q9C0F1 390 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 PRSS16Q9NQE7 514 aa20.94■□□□□ 0.94
MRPL40-201ENST00000333130 PACSIN2Q9UNF0 486 aaPredicted RBP20.94■□□□□ 0.94
MRPL40-201ENST00000333130 DFFAO00273 331 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 SIN3BO75182 1162 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 SRCP12931 536 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 NDUFV2P19404 249 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 AMPD1P23109 780 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 CDKN2BP42772 138 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 RWDD2BP57060 319 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 DMWDQ09019 674 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 SERINC3Q13530 473 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 ELAVL3Q14576 367 aaKnown RBP20.93■□□□□ 0.94
MRPL40-201ENST00000333130 TTC31Q49AM3 519 aaPredicted RBP20.93■□□□□ 0.94
MRPL40-201ENST00000333130 AFMIDQ63HM1 303 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 ZNF776Q68DI1 518 aaPredicted RBP20.93■□□□□ 0.94
MRPL40-201ENST00000333130 MFSD7Q6UXD7 560 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 LINGO4Q6UY18 593 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 TMPRSS6Q8IU80 811 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 RCOR2Q8IZ40 523 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 NPWQ8N729 165 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 UBL4BQ8N7F7 174 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 SIPA1Q96FS4 1042 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 RBM41Q96IZ5 413 aaKnown RBP20.93■□□□□ 0.94
MRPL40-201ENST00000333130 CELF6Q96J87 481 aaKnown RBP20.93■□□□□ 0.94
MRPL40-201ENST00000333130 MRGPRX1Q96LB2 322 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 SEMA4AQ9H3S1 761 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 LRRC19Q9H756 370 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 SP110Q9HB58 689 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 ETNK2Q9NVF9 386 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 RAB23Q9ULC3 237 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 SHROOM3Q8TF72 1996 aa20.93■□□□□ 0.94
MRPL40-201ENST00000333130 RPP40O75818 363 aaKnown RBP20.92■□□□□ 0.94
MRPL40-201ENST00000333130 ZMPSTE24O75844 475 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 ZRANB2O95218 330 aaKnown RBP eCLIP20.92■□□□□ 0.94
MRPL40-201ENST00000333130 DNTTP04053 509 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 GLDCP23378 1020 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 ARF5P84085 180 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 ZBTB16Q05516 673 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 PPP2R5EQ16537 467 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 C22orf39Q6P5X5 142 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 SPOCD1Q6ZMY3 1216 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 CEP68Q76N32 757 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 PCDH20Q8N6Y1 951 aaKnown RBP20.92■□□□□ 0.94
MRPL40-201ENST00000333130 PQLC3Q8N755 202 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 OR8D1Q8WZ84 308 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 RNF25Q96BH1 459 aaPredicted RBP20.92■□□□□ 0.94
MRPL40-201ENST00000333130 RNF157Q96PX1 679 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 CD248Q9HCU0 757 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms