RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CMC1Q7Z7K0 106 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ZNF786Q8N393 782 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 EFCAB3Q8N7B9 438 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 SNX27Q96L92 541 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 C12orf42Q96LP6 360 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ELOVL6Q9H5J4 265 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 MRPL17Q9NRX2 175 aaKnown RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 MOXD2PA6NHM9 499 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ATP6V1E1P36543 226 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 DAB2P98082 770 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 BST1Q10588 318 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PLD5Q8N7P1 536 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 INPP5DQ92835 1189 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PRPF18Q99633 342 aaKnown RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PTCH2Q9Y6C5 1203 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 GNG14A0A1W2PPG7 69 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 IGSF6O95976 241 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PKNOX1P55347 436 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 DUSP4Q13115 394 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ACOX1Q15067 660 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 GRAMD4Q6IC98 578 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 PPP4R4Q6NUP7 873 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 TNIP2Q8NFZ5 429 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 KCTD14Q9BQ13 255 aaPredicted RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ZNF556Q9HAH1 456 aa13.2□□□□□ -0.3
VSTM4-202ENST00000332853 UXTQ9UBK9 157 aaPredicted RBP13.2□□□□□ -0.3
VSTM4-202ENST00000332853 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CDC16Q13042 620 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CAMK2GQ13555 558 aaPredicted RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 KPNB1Q14974 876 aaKnown RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CYP2R1Q6VVX0 501 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ALYREFQ86V81 257 aaKnown RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 NTPCRQ9BSD7 190 aaKnown RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 C2orf71A6NGG8 1288 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ZNF7P17097 686 aaPredicted RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 PTGIRP43119 386 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CPT1BQ92523 772 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CORO1BQ9BR76 489 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 TXNRD2Q9NNW7 524 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 UNGP13051 313 aaPredicted RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CHI3L1P36222 383 aaPredicted RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 PRIM2P49643 509 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 FBXW4P57775 412 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 KCNJ2P63252 427 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 PDK4Q16654 411 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ISLR2Q6UXK2 745 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 TRMT11Q7Z4G4 463 aaKnown RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 C10orf107Q8IVU9 208 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 SEPHS2Q99611 448 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 HGH1Q9BTY7 390 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 KLHL4Q9C0H6 718 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 VTI1BQ9UEU0 232 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ALBP02768 609 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 DDX5P17844 614 aaKnown RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 GRIA4P48058 902 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 TTC33Q6PID6 262 aaPredicted RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 TRABD2AQ86V40 505 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ATAD1Q8NBU5 361 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 SERAC1Q96JX3 654 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CDRT15Q96T59 188 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 SPG21Q9NZD8 308 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ACADSP16219 412 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 HDCP19113 662 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 FECHP22830 423 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 CDK7P50613 346 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 RPL14P50914 215 aaKnown RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 ZNF135P52742 658 aaPredicted RBP13.19□□□□□ -0.3
VSTM4-202ENST00000332853 SLC39A4Q6P5W5 647 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 JADE3Q92613 823 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 NR2E3Q9Y5X4 410 aa13.19□□□□□ -0.3
VSTM4-202ENST00000332853 LOC102724159A0A0B4J2E5 919 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 SAC3D1A6NKF1 404 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 RAD51BO15315 384 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 CTPS1P17812 591 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 ATP6V1B2P21281 511 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 CYP2C18P33260 490 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 PWP2Q15269 919 aaKnown RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 DCAF12L1Q5VU92 463 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 MINDY3Q9H8M7 445 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 SNX15Q9NRS6 342 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 GMIPQ9P107 970 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 TLR5O60602 858 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 ZNF682O95780 498 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 ABCB1P08183 1280 aaPredicted RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 PEX5P50542 639 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 GDF10P55107 478 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 SLC25A3Q00325 362 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 TUSC3Q13454 348 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 DNAJC14Q6Y2X3 702 aaPredicted RBP13.18□□□□□ -0.3
VSTM4-202ENST00000332853 BATF3Q9NR55 127 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 ACTL7BQ9Y614 415 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 FGFR1P11362 822 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 TCF4P15884 667 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 CRYMQ14894 314 aa13.18□□□□□ -0.3
VSTM4-202ENST00000332853 IYDQ6PHW0 289 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms