RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 OXCT2Q9BYC2 517 aaPredicted RBP15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 CATSPERBQ9H7T0 1116 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 GLOD4Q9HC38 313 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 SLC39A10Q9ULF5 831 aa15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 NYNRINQ9P2P1 1898 aaKnown RBP15.12■□□□□ 0.01
CLCNKA-201ENST00000331433 E9PAM4 449 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 FGF10O15520 208 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 HLA-DQB2P05538 268 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 GRK2P25098 689 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 GRK4P32298 578 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 MAP2K2P36507 400 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 OR1G1P47890 313 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 ZNF33AQ06730 810 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 TUBB3Q13509 450 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 MBTPS1Q14703 1052 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 GRM3Q14832 879 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 CCDC153Q494R4 210 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 KHDC1Q4VXA5 237 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 FAM26DQ5JW98 314 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 PAXIP1Q6ZW49 1069 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 CLEC14AQ86T13 490 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 LINC00523Q86TU6 105 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 PCSK9Q8NBP7 692 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 RBM15BQ8NDT2 890 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 PPP4R1Q8TF05 950 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 LINC01599Q8WXQ3 324 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 IL12RB2Q99665 862 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 TRPV6Q9H1D0 765 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 ATXN3LQ9H3M9 355 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 AAR2Q9Y312 384 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 MATN3O15232 486 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 TIMM44O43615 452 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 PMPCBO75439 489 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 SERPINA6P08185 405 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 CKBP12277 381 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 ABCE1P61221 599 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 KPNB1Q14974 876 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 VWA5B1Q5TIE3 1220 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 DENND5AQ6IQ26 1287 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 TLDC1Q6P9B6 456 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 NAPRTQ6XQN6 538 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 GPR152Q8TDT2 470 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 FCRL5Q96RD9 977 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 RBM22Q9NW64 420 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 RNF186Q9NXI6 227 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 CPSF2Q9P2I0 782 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 TLL2Q9Y6L7 1015 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 MYLKQ15746 1914 aa15.11■□□□□ 0.01
CLCNKA-201ENST00000331433 ARHGEF37A1IGU5 675 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 KCNU1A8MYU2 1149 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 G3V2L1 256 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 MPOP05164 745 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 GNAZP19086 355 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 CST5P28325 142 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 CSE1LP55060 971 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 PIK3R6Q5UE93 754 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 PDPK2PQ6A1A2 396 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 KLHDC8BQ8IXV7 354 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 WDR60Q8WVS4 1066 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 MOCOSQ96EN8 888 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 ACSS2Q9NR19 701 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 RGS18Q9NS28 235 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 TAGLN3Q9UI15 199 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 PHGDHO43175 533 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 VAPBO95292 243 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 GABRB3P28472 473 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 PGM1P36871 562 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 ACLYP53396 1101 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 USP46P62068 366 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 DSC1Q08554 894 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 PKN3Q6P5Z2 889 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 RAPH1Q70E73 1250 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 TFAP2DQ7Z6R9 452 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 ZC3HC1Q86WB0 502 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 DENND6AQ8IWF6 608 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 LZTR1Q8N653 840 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 TTC9BQ8N6N2 239 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 ENDOVQ8N8Q3 282 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 RTL3Q8N8U3 475 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 ZCWPW1Q9H0M4 648 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 NMRAL1Q9HBL8 299 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 SLC2A6Q9UGQ3 507 aa15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 RPL26L1Q9UNX3 145 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-201ENST00000331433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 INPPL1O15357 1258 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 PSMD3O43242 534 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 ANXA9O76027 345 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 PAX3P23760 479 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 AVPR1AP37288 418 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 MPP1Q00013 466 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 USP4Q13107 963 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 ACSBG2Q5FVE4 666 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 NOMO2Q5JPE7 1267 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 PCID2Q5JVF3 399 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 RABGAP1LQ5R372 815 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 ESRP1Q6NXG1 681 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 SLC24A5Q71RS6 500 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms