RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 LINC00523Q86TU6 105 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 CFAP52Q8N1V2 620 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 DNAJC5GQ8N7S2 189 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 PSMG2Q969U7 264 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 ZNF669Q96BR6 464 aaPredicted RBP17.26■□□□□ 0.35
DDX41-201ENST00000330503 MTBPQ96DY7 904 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 CERS2Q96G23 380 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 TBL1YQ9BQ87 522 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 ANKRD65E5RJM6 399 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 OAS1P00973 400 aaKnown RBP17.26■□□□□ 0.35
DDX41-201ENST00000330503 ACVRL1P37023 503 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 CCNFP41002 786 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 ETV4P43268 484 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 RENBPP51606 427 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 GEMP55040 296 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 SLC10A7Q0GE19 358 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 TWF1Q12792 350 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 IFT88Q13099 833 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 PLD1Q13393 1074 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 NAB1Q13506 487 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 SMAD1Q15797 465 aaKnown RBP17.26■□□□□ 0.35
DDX41-201ENST00000330503 ZNF449Q6P9G9 518 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 PACS1Q6VY07 963 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 CDHR3Q6ZTQ4 885 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 TMEM150AQ86TG1 271 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 TCEAL8Q8IYN2 117 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 TEX26Q8N6G2 289 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 IPMKQ8NFU5 416 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 SPOCK2Q92563 424 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 WBP2Q969T9 261 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 MFSD3Q96ES6 412 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 YME1L1Q96TA2 773 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 FICDQ9BVA6 458 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 IL22Q9GZX6 179 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 NSRP1Q9H0G5 558 aaKnown RBP17.26■□□□□ 0.35
DDX41-201ENST00000330503 SOX13Q9UN79 622 aa17.26■□□□□ 0.35
DDX41-201ENST00000330503 RRP15Q9Y3B9 282 aaKnown RBP17.26■□□□□ 0.35
DDX41-201ENST00000330503 C2orf78A6NCI8 922 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 SNX3O60493 162 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 BAIAP3O94812 1187 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 DHRS4L1P0CG22 281 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 SERINC3Q13530 473 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 IHHQ14623 411 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 POLD3Q15054 466 aaPredicted RBP17.25■□□□□ 0.35
DDX41-201ENST00000330503 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDX41-201ENST00000330503 CCDC197Q8NCU1 140 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 CDKL2Q92772 493 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 MRGPRX2Q96LB1 330 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 KIFC1Q9BW19 673 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 NACA2Q9H009 215 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 SLC25A51Q9H1U9 297 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 NT5MQ9NPB1 228 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 IL23AQ9NPF7 189 aa17.25■□□□□ 0.35
DDX41-201ENST00000330503 F5H5T6 163 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 H3BNC9 293 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 AP3B1O00203 1094 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 TEX28O15482 410 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 RAMP2O60895 175 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 PMPCBO75439 489 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 STC2O76061 302 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 LINC00271P0C7V0 271 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 NMBRP28336 390 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 OR1E1P30953 314 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 MAPKAPK2P49137 400 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 HARS2P49590 506 aaKnown RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 TNK2Q07912 1038 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 ZKSCAN8Q15776 578 aaPredicted RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 KDELC1Q6UW63 502 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 RANBP10Q6VN20 620 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 MICALCLQ6ZW33 695 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 SRLQ86TD4 932 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 RASSF3Q86WH2 238 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 DENND1CQ8IV53 801 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 ZNF75CPQ92670 426 aaPredicted RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 AZIN2Q96A70 460 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 CABS1Q96KC9 395 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 KLF16Q9BXK1 252 aaPredicted RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 MRPL17Q9NRX2 175 aaKnown RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 KIAA1671Q9BY89 1806 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 PRRG1O14668 218 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 SPATA31D3P0C874 917 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 ALADP13716 330 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 CNTFP26441 200 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 YBEYP58557 167 aaPredicted RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 IL10RBQ08334 325 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 TAF12Q16514 161 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 PARP15Q460N3 678 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 MARC1Q5VT66 337 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 SPATA31D4Q6ZUB0 917 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 PLD4Q96BZ4 506 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 IMP4Q96G21 291 aaKnown RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 ZNF778Q96MU6 729 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 SRPK1Q96SB4 655 aaKnown RBP17.24■□□□□ 0.35
DDX41-201ENST00000330503 SP110Q9HB58 689 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 RXFP1Q9HBX9 757 aa17.24■□□□□ 0.35
DDX41-201ENST00000330503 MKI67P46013 3256 aaKnown RBP17.23■□□□□ 0.35
DDX41-201ENST00000330503 COPEO14579 308 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 MMP2P08253 660 aa17.23■□□□□ 0.35
DDX41-201ENST00000330503 ELF1P32519 619 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms