RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 MID2Q9UJV3 735 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 TRHDEQ9UKU6 1024 aa15.65■□□□□ 0.1
BRCC3-201ENST00000330045 SMIM35A0A1B0GVV1 85 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 MANSC4A6NHS7 340 aaPredicted RBP15.64■□□□□ 0.09
BRCC3-201ENST00000330045 I6L893 689 aaPredicted RBP15.64■□□□□ 0.09
BRCC3-201ENST00000330045 MTSS1O43312 755 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 ZNF865P0CJ78 1059 aaPredicted RBP15.64■□□□□ 0.09
BRCC3-201ENST00000330045 THRAP10827 490 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 TPH1P17752 444 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 YY1P25490 414 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 SERPINB5P36952 375 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 HCAR3P49019 387 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 NUMBP49757 651 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 AQP4P55087 323 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 SATB1Q01826 763 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 SCAPQ12770 1279 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 MSLNQ13421 630 aaPredicted RBP15.64■□□□□ 0.09
BRCC3-201ENST00000330045 TRIP10Q15642 601 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 ZFAND2BQ8WV99 257 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 TSPAN18Q96SJ8 248 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 MCMBPQ9BTE3 642 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 ULBP1Q9BZM6 244 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 IL22Q9GZX6 179 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 BRD8Q9H0E9 1235 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 FBXW11Q9UKB1 542 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 SLC39A10Q9ULF5 831 aa15.64■□□□□ 0.09
BRCC3-201ENST00000330045 GOLGA8QA0A0J9YX86 632 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 GOLGA8OA6NCC3 632 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 YJEFN3A6XGL0 299 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 GOLGA8NF8WBI6 632 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 AMHP03971 560 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 APOA4P06727 396 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 CHRNGP07510 517 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 FAM200BP0CF97 657 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 SMIM10L2AP0DMW4 78 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 SMIM10L2BP0DMW5 78 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 NFKB1P19838 968 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 ZBTB17Q13105 803 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 WSCD1Q658N2 575 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 ITPRIPL1Q6GPH6 555 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 TMEM40Q8WWA1 233 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 HDAC11Q96DB2 347 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 ACE2Q9BYF1 805 aaPredicted RBP15.63■□□□□ 0.09
BRCC3-201ENST00000330045 TASP1Q9H6P5 420 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 WDR55Q9H6Y2 383 aaPredicted RBP15.63■□□□□ 0.09
BRCC3-201ENST00000330045 TLK1Q9UKI8 766 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 ABT1Q9ULW3 272 aaKnown RBP15.63■□□□□ 0.09
BRCC3-201ENST00000330045 RAP2CQ9Y3L5 183 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 H3BNX3 289 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 GOLGA8TH3BQL2 631 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 MATN2O00339 956 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 MPSTP25325 297 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 HADHAP40939 763 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 RABGGTBP53611 331 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 ANO4Q32M45 955 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 INTS6LQ5JSJ4 861 aaKnown RBP15.63■□□□□ 0.09
BRCC3-201ENST00000330045 ARHGAP18Q8N392 663 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 MOCOSQ96EN8 888 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 DRC3Q9H069 523 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 GNEQ9Y223 722 aaKnown RBP15.63■□□□□ 0.09
BRCC3-201ENST00000330045 ZNF236Q9UL36 1845 aa15.63■□□□□ 0.09
BRCC3-201ENST00000330045 RGSL1A5PLK6 1076 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 AIM2O14862 343 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 CASQ2O14958 399 aaPredicted RBP15.62■□□□□ 0.09
BRCC3-201ENST00000330045 HDAC3O15379 428 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 FBXO21O94952 628 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 NCAM1P13591 858 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 VCLP18206 1134 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 PIK3R1P27986 724 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 NMBRP28336 390 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 RPL14P50914 215 aaKnown RBP15.62■□□□□ 0.09
BRCC3-201ENST00000330045 DAOAP59103 153 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 GRM3Q14832 879 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 SNX17Q15036 470 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 UBXN11Q5T124 520 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 MAP3K21Q5TCX8 1036 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 KIAA0319Q5VV43 1072 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 LIPMQ5VYY2 423 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 SEL1L3Q68CR1 1132 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 ST13P4Q8IZP2 240 aaPredicted RBP15.62■□□□□ 0.09
BRCC3-201ENST00000330045 RDH11Q8TC12 318 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 DNAJB3Q8WWF6 145 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 VAT1Q99536 393 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 UBP1Q9NZI7 540 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 ANKRD6Q9Y2G4 727 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 C9IYK1 514 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 TK2O00142 265 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 NEMP1O14524 444 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 SAT1P21673 171 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 GRIA4P48058 902 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 NUDT2P50583 147 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 GJA9P57773 515 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 GALNT2Q10471 571 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 ITGA7Q13683 1181 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 ARL13BQ3SXY8 428 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 RASIP1Q5U651 963 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 IQSEC1Q6DN90 963 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 ZYG11AQ6WRX3 759 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 ARRDC4Q8NCT1 418 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 CNDP1Q96KN2 507 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms