RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ADCY2Q08462 1091 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 PPP2R5DQ14738 602 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 CCDC33Q8N5R6 958 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 GOLGA6L1Q8N7Z2 621 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 SERPINB11Q96P15 392 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 HAPLN3Q96S86 360 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 BRD8Q9H0E9 1235 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 DPH5Q9H2P9 285 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 DNAJC17Q9NVM6 304 aaKnown RBP16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 DONSONQ9NYP3 566 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 GRHL1Q9NZI5 618 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 STOML2Q9UJZ1 356 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 FBXO4Q9UKT5 387 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 SNX24Q9Y343 169 aa16.85■□□□□ 0.29
PDLIM1-201ENST00000329399 LAMA1P25391 3075 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 BCLAF3A2AJT9 711 aaKnown RBP16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 ACTN2P35609 894 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 EIF2DP41214 584 aaKnown RBP16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 GRIA2P42262 883 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 HARS2P49590 506 aaKnown RBP16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 NME3Q13232 169 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 RAB6CQ53S08 254 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 PPP6R3Q5H9R7 873 aaPredicted RBP16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 CROCCP2Q86T23 111 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 FAM131BQ86XD5 332 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 CDKL3Q8IVW4 592 aaPredicted RBP16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 KRT222Q8N1A0 295 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 CCDC185Q8N715 623 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 PCDH19Q8TAB3 1148 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 CSPG4P5Q96PW8 444 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 PHACTR1Q9C0D0 580 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 RAB6CQ9H0N0 254 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 ANLNQ9NQW6 1124 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 PIGVQ9NUD9 493 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 DEC1Q9P2X7 70 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 HPCAL4Q9UM19 191 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 TLR6Q9Y2C9 796 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 ZNF510Q9Y2H8 683 aa16.84■□□□□ 0.29
PDLIM1-201ENST00000329399 DMXL1Q9Y485 3027 aa16.83■□□□□ 0.29
PDLIM1-201ENST00000329399 SYNJ2BP-COX16A0A087WUM0 186 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 TBC1D3BA6NDS4 549 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 CHURC1-FNTBB4DL54 471 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 I6L893 689 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 IRAK2O43187 625 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 RRP9O43818 475 aaKnown RBP16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 OPA1O60313 960 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 PPFIA2O75334 1257 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 RBP3P10745 1247 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 IVDP26440 423 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 CCR1P32246 355 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 TIE1P35590 1138 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 NBL1P41271 181 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 CCR3P51677 355 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 PLTPP55058 493 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 NRG1Q02297 640 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 RING1Q06587 406 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 SRSF5Q13243 272 aaKnown RBP16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 ADGRF1Q5T601 910 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 HEATR6Q6AI08 1181 aaKnown RBP16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 CPXM2Q8N436 756 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 PQLC3Q8N755 202 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 IL17RCQ8NAC3 791 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 WFDC5Q8TCV5 224 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 RTP4Q96DX8 246 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 KCTD15Q96SI1 283 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 RUFY1Q96T51 708 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 ACOX2Q99424 681 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 EPAS1Q99814 870 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 TRIM31Q9BZY9 425 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 ARHGEF38Q9NXL2 777 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 COX16Q9P0S2 106 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 ANAPC5Q9UJX4 755 aa16.83■□□□□ 0.28
PDLIM1-201ENST00000329399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 SGK1O00141 431 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 ACSL4O60488 711 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 ADAM23O75077 832 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 MOCS2O96007 188 aaPredicted RBP16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 APODP05090 189 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 HOXD9P28356 352 aaPredicted RBP16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 CHKAP35790 457 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 FNTBP49356 437 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 ATXN1P54253 815 aaKnown RBP16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 DYNLT1P63172 113 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 SEMA3BQ13214 749 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 MORF4L2Q15014 288 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 GEN1Q17RS7 908 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 ZNF528Q3MIS6 628 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 FBXO43Q4G163 708 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 TMEM215Q68D42 235 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 LRIG3Q6UXM1 1119 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 TMEM92Q6UXU6 159 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 ASCL5Q7RTU5 278 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 TERB1Q8NA31 727 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 ZBTB44Q8NCP5 570 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 ERLEC1Q96DZ1 483 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 C1orf74Q96LT6 269 aa16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 FRMD8Q9BZ67 464 aaPredicted RBP16.82■□□□□ 0.28
PDLIM1-201ENST00000329399 CWC15Q9P013 229 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms