RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 KCND2Q9NZV8 630 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 VAV3Q9UKW4 847 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CLUHO75153 1309 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 A0A0B4J203 849 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 DENND3A2RUS2 1198 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 KCNK2O95069 426 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 ZSCAN5DPP0CG00 497 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 NCAM1P13591 858 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CRKP46108 304 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 HCAR3P49019 387 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CYP2J2P51589 502 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 BFSP2Q13515 415 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 ALCAMQ13740 583 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 TAF5Q15542 800 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CLEC16AQ2KHT3 1053 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 STRIP1Q5VSL9 837 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 SLC9A4Q6AI14 798 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 FIP1L1Q6UN15 594 aaKnown RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 C1orf186Q6ZWK4 172 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 PTAR1Q7Z6K3 402 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 SNX32Q86XE0 403 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 CCDC60Q8IWA6 550 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 OR2T3Q8NH03 318 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 TRIM63Q969Q1 353 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 DDX28Q9NUL7 540 aaKnown RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 MAT2BQ9NZL9 334 aa12.05□□□□□ -0.48
SHMT2-201ENST00000328923 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-201ENST00000328923 VWA5AO00534 786 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 CYB561D2O14569 222 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 DNALI1O14645 258 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SLC9A3R1O14745 358 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SGPL1O95470 568 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 NUDT1P36639 197 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 ACOT2P49753 483 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 COG2Q14746 738 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 HERC3Q15034 1050 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 C6orf10Q5SRN2 563 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 ZCCHC23Q6ZST2 131 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 GSTA5Q7RTV2 222 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 BPIFB6Q8NFQ5 453 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SNX19Q92543 992 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SLC39A13Q96H72 371 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 MAGED4Q96JG8 741 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 ZDHHC15Q96MV8 337 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 C1QTNF7Q9BXJ2 289 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SERHL2Q9H4I8 314 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 TUFT1Q9NNX1 390 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 TIGARQ9NQ88 270 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 DNMT3LQ9UJW3 386 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 PSME2Q9UL46 239 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 OR5K4A6NMS3 321 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 GOLGA8SH3BPF8 625 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SHOXO15266 292 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 PCNAP12004 261 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 GFAPP14136 432 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 CD1EP15812 388 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 ATICP31939 592 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 PKNOX1P55347 436 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 FKBP1AP62942 108 aaKnown RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 TNK2Q07912 1038 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 GRSF1Q12849 480 aaKnown RBP eCLIP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 PRR16Q569H4 304 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 DACT2Q5SW24 774 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 ACAD10Q6JQN1 1059 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 METTL2BQ6P1Q9 378 aaKnown RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 DCUN1D2Q6PH85 259 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 NSMFQ6X4W1 530 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 KIAA0408Q6ZU52 694 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 TMEM35BQ8NCS4 154 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 ZSCAN18Q8TBC5 510 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SHC3Q92529 594 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 TTC9Q92623 222 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 CMTM5Q96DZ9 223 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 TOE1Q96GM8 510 aaKnown RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SNX18Q96RF0 628 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 MMP19Q99542 508 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 MCMBPQ9BTE3 642 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 RSPH9Q9H1X1 276 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 IGSF5Q9NSI5 407 aa12.04□□□□□ -0.48
SHMT2-201ENST00000328923 DUS2Q9NX74 493 aaKnown RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 SUCOQ9UBS9 1254 aaKnown RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 PTBP2Q9UKA9 531 aaKnown RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 BRCA1P38398 1863 aaKnown RBP12.04□□□□□ -0.48
SHMT2-201ENST00000328923 AKAP10O43572 662 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 PSTPIP1O43586 416 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 AKR1B1P15121 316 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 SPNP16150 400 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 MAPK4P31152 587 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 L1CAMP32004 1257 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 HTR2BP41595 481 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 PTPN5P54829 565 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-201ENST00000328923 RHAGQ02094 409 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 NFIAQ12857 509 aa12.03□□□□□ -0.48
SHMT2-201ENST00000328923 MTM1Q13496 603 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms