RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TNK2Q07912 1038 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 HNRNPDQ14103 355 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 GRM2Q14416 872 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 TRADDQ15628 312 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 IZUMO3Q5VZ72 239 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 ITPRIPL1Q6GPH6 555 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 CPA6Q8N4T0 437 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 ST13P5Q8NFI4 369 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 PPM1EQ8WY54 764 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 CEP41Q9BYV8 373 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 EBF3Q9H4W6 596 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 IGSF9Q9P2J2 1179 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 NUMBLQ9Y6R0 609 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 ZMPSTE24O75844 475 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 JCHAINP01591 159 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 ITIH2P19823 946 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 FDFT1P37268 417 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 RENBPP51606 427 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 CALCOCO2Q13137 446 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 LEXMQ3ZCV2 418 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 TEX26Q8N6G2 289 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 IFT81Q8WYA0 676 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 ZNF419Q96HQ0 510 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 TEKT5Q96M29 485 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 C2orf49Q9BVC5 232 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 GBA3Q9H227 469 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 ECT2Q9H8V3 914 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 ABCB8Q9NUT2 735 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 GGA2Q9UJY4 613 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 FBXO10Q9UK96 956 aa10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 TPX2Q9ULW0 747 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-201ENST00000327028 CXorf51AA0A1B0GTR3 108 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 C2CD4DB7Z1M9 353 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 CBX4O00257 560 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 GLDCP23378 1020 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 HLA-FP30511 346 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 CAV1Q03135 178 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 DMC1Q14565 340 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 RFTN1Q14699 578 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 LBRQ14739 615 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PARP6Q2NL67 630 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 GAB4Q2WGN9 574 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PLEKHG6Q3KR16 790 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PITRM1Q5JRX3 1037 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 RNASEH2BQ5TBB1 312 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ZDHHC24Q6UX98 284 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 CCNI2Q6ZMN8 369 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PCGF5Q86SE9 256 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 USP33Q8TEY7 942 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ART4Q93070 314 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 XPO6Q96QU8 1125 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 TRMT61BQ9BVS5 477 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PHF7Q9BWX1 381 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 RAB6BQ9NRW1 208 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ZDHHC18Q9NUE0 388 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 UBA2Q9UBT2 640 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 VPS51Q9UID3 782 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ZBTB24O43167 697 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 SNAP91O60641 907 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 HLA-DQB2P05538 268 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PABPC1P11940 636 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 SP100P23497 879 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ECHS1P30084 290 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 GDI1P31150 447 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 CD68P34810 354 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 MAGEA6P43360 314 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 MMP13P45452 471 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ITGA8P53708 1063 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 NR1H3Q13133 447 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 SEMA5AQ13591 1074 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 RUNX3Q13761 415 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 HLTFQ14527 1009 aaKnown RBP eCLIP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 BRD3Q15059 726 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 SMAD2Q15796 467 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 FUT11Q495W5 492 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 FAM182AQ5T1J6 154 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 MARC1Q5VT66 337 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 HIBCHQ6NVY1 386 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PID1Q7Z2X4 250 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 KIAA0907Q7Z7F0 614 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 HOOK3Q86VS8 718 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ETFBKMTQ8IXQ9 262 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 PPIL6Q8IXY8 311 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 APCDD1Q8J025 514 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 CNTD1Q8N815 330 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 CPT1BQ92523 772 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ACDQ96AP0 544 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 AGAP3Q96P47 875 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 RBM22Q9NW64 420 aaKnown RBP eCLIP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ANAPC5Q9UJX4 755 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 INTS6Q9UL03 887 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 NFU1Q9UMS0 254 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 SHOC2Q9UQ13 582 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 ATP8A1Q9Y2Q0 1164 aa10.44□□□□□ -0.74
VIPAS39-201ENST00000327028 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms