RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 SMAD3P84022 425 aaKnown RBP18.77■□□□□ 0.6
USP39-201ENST00000323701 ITIH5Q86UX2 942 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 ZNF354CQ86Y25 554 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 KLHDC8BQ8IXV7 354 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 ARFGAP2Q8N6H7 521 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 STMN4Q9H169 189 aaPredicted RBP18.77■□□□□ 0.6
USP39-201ENST00000323701 SSX2IPQ9Y2D8 614 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 PCDHA11Q9Y5I1 949 aa18.77■□□□□ 0.6
USP39-201ENST00000323701 CHD5Q8TDI0 1954 aa18.77■□□□□ 0.59
USP39-201ENST00000323701 A0A1W2PRU2 124 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 TMEM120BA0PK00 339 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 LRG1P02750 347 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 PPP3CCP48454 512 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 CLCN4P51793 760 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 SEC24CP53992 1094 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 KLHL38Q2WGJ6 581 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 ADGRF1Q5T601 910 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 TIGD7Q6NT04 549 aaPredicted RBP18.76■□□□□ 0.59
USP39-201ENST00000323701 KDELC2Q7Z4H8 507 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 PGBD5Q8N414 524 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 OR7D4Q8NG98 312 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 FCRL3Q96P31 734 aaPredicted RBP18.76■□□□□ 0.59
USP39-201ENST00000323701 FCRL5Q96RD9 977 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 MLXIPLQ9NP71 852 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 STK39Q9UEW8 545 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 CPQQ9Y646 472 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 DENND4CQ5VZ89 1909 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 GLUD1P00367 558 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 BRAFP15056 766 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 GLDCP23378 1020 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 PRKCHP24723 683 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 STEAP4Q687X5 459 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 LRRC49Q8IUZ0 686 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 RIBC1Q8N443 379 aaPredicted RBP18.76■□□□□ 0.59
USP39-201ENST00000323701 PPM1NQ8N819 430 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 GSDMBQ8TAX9 411 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 SLC44A1Q8WWI5 657 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 CORO1BQ9BR76 489 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 NT5MQ9NPB1 228 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 TLR9Q9NR96 1032 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 MOCS1Q9NZB8 636 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 FETUBQ9UGM5 382 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 LZTS1Q9Y250 596 aa18.76■□□□□ 0.59
USP39-201ENST00000323701 ZNF189O75820 626 aaPredicted RBP18.75■□□□□ 0.59
USP39-201ENST00000323701 HOXD9P28356 352 aaPredicted RBP18.75■□□□□ 0.59
USP39-201ENST00000323701 ETFBP38117 255 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 MSH2P43246 934 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 MAPKAPK2P49137 400 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 NIPAL4Q0D2K0 466 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 HNRNPDQ14103 355 aaKnown RBP18.75■□□□□ 0.59
USP39-201ENST00000323701 DENND5AQ6IQ26 1287 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 C4orf33Q8N1A6 199 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 DNAAF3Q8N9W5 541 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 IPMKQ8NFU5 416 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 ATXN2LQ8WWM7 1075 aaKnown RBP18.75■□□□□ 0.59
USP39-201ENST00000323701 SMG9Q9H0W8 520 aaKnown RBP18.75■□□□□ 0.59
USP39-201ENST00000323701 ATXN3LQ9H3M9 355 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 SP110Q9HB58 689 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 MUSKO15146 869 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 SPAG7O75391 227 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 PMPCBO75439 489 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 SPAG6O75602 509 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 KRT15P19012 456 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 LRRC14Q15048 493 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 RASA2Q15283 850 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 PARP15Q460N3 678 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 TAOK1Q7L7X3 1001 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 CTAGE3PQ8IX95 158 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 MICAL1Q8TDZ2 1067 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 AZIN2Q96A70 460 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 ASB3Q9Y575 518 aa18.75■□□□□ 0.59
USP39-201ENST00000323701 ERI2A8K979 691 aaKnown RBP18.74■□□□□ 0.59
USP39-201ENST00000323701 ATP9BO43861 1147 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 CA3P07451 260 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 MMP2P08253 660 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 F7P08709 466 aaPredicted RBP18.74■□□□□ 0.59
USP39-201ENST00000323701 MYL4P12829 197 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 STX2P32856 288 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 CRYMQ14894 314 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 PABPC1LQ4VXU2 614 aaKnown RBP18.74■□□□□ 0.59
USP39-201ENST00000323701 ACBD5Q5T8D3 534 aaPredicted RBP18.74■□□□□ 0.59
USP39-201ENST00000323701 FOXR1Q6PIV2 292 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 MGARPQ8TDB4 240 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 BHMTQ93088 406 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 TCEAL4Q96EI5 215 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 MRGPRX2Q96LB1 330 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 ZNF778Q96MU6 729 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 KLF6Q99612 283 aaPredicted RBP18.74■□□□□ 0.59
USP39-201ENST00000323701 EMILIN2Q9BXX0 1053 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 TRABDQ9H4I3 376 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 LRRC40Q9H9A6 602 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 PDFQ9HBH1 243 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 KCNK9Q9NPC2 374 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 PPANQ9NQ55 473 aaKnown RBP18.74■□□□□ 0.59
USP39-201ENST00000323701 FAM159BA6NKW6 160 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 EPCAMP16422 314 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 ADRA1AP35348 466 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 CHRNA4P43681 627 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 CDH4P55283 916 aa18.74■□□□□ 0.59
USP39-201ENST00000323701 DSC2Q02487 901 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms