RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 STX7O15400 261 aaKnown RBP14.96□□□□□ -0.01
TCOF1-201ENST00000323668 MPSTP25325 297 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 ADRA1BP35368 520 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 RGS4P49798 205 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 PLIN5Q00G26 463 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 CTBP1Q13363 440 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 SNX19Q92543 992 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 FAM162AQ96A26 154 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 SLC7A6OSQ96CW6 309 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-201ENST00000323668 ASIC4Q96FT7 647 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 MRPL57Q9BQC6 102 aaKnown RBP14.96□□□□□ -0.01
TCOF1-201ENST00000323668 FAM124BQ9H5Z6 455 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-201ENST00000323668 PDGFCQ9NRA1 345 aa14.96□□□□□ -0.01
TCOF1-201ENST00000323668 ADARB2Q9NS39 739 aaKnown RBP14.96□□□□□ -0.01
TCOF1-201ENST00000323668 CASTOR2A6NHX0 329 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 NCF1BA6NI72 391 aaPredicted RBP14.96□□□□□ -0.02
TCOF1-201ENST00000323668 NCF1CA8MVU1 366 aaPredicted RBP14.96□□□□□ -0.02
TCOF1-201ENST00000323668 M0R3G1 203 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 VPS26AO75436 327 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 NCF1P14598 390 aaPredicted RBP14.96□□□□□ -0.02
TCOF1-201ENST00000323668 FGFR3P22607 806 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 PSEN1P49768 467 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 CA9Q16790 459 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 PTRHD1Q6GMV3 140 aaKnown RBP14.96□□□□□ -0.02
TCOF1-201ENST00000323668 C15orf39Q6ZRI6 1047 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 ADCY4Q8NFM4 1077 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 RBBP8Q99708 897 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 GORASP1Q9BQQ3 440 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 ABHD16BQ9H3Z7 469 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 SEPT3Q9UH03 358 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 POMPQ9Y244 141 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 CACNA1SQ13698 1873 aa14.96□□□□□ -0.02
TCOF1-201ENST00000323668 DAB1O75553 588 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 OAS1P00973 400 aaKnown RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 CCDC166P0CW27 439 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 CDH2P19022 906 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 IDH3AP50213 366 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 LIMK2P53671 638 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 TAS1R3Q7RTX0 852 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 ZNF395Q9H8N7 513 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 ARHGEF4Q9NR80 690 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 FBXO5Q9UKT4 447 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 PKP3Q9Y446 797 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DLDP09622 509 aaKnown RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 TFEBP19484 476 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 PEX2P28328 305 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 SLC10A6Q3KNW5 377 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 B3GNT9Q6UX72 402 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 CAMK1DQ8IU85 385 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DSELQ8IZU8 1212 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 MIER2Q8N344 545 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 GALNT15Q8N3T1 639 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 TWNKQ96RR1 684 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DCUN1D5Q9BTE7 237 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 MRPS26Q9BYN8 205 aaKnown RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 PDZD7Q9H5P4 517 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DTLQ9NZJ0 730 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 HMGXB4Q9UGU5 601 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 PCDHB12Q9Y5F1 795 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 C2orf81A6NN90 581 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DEAF1O75398 565 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 LTA4HP09960 611 aaKnown RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 MBTD1Q05BQ5 628 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 FOXD4Q12950 439 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DEFB132Q7Z7B7 95 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DCUN1D1Q96GG9 259 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 CEP19Q96LK0 163 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 DUSP16Q9BY84 665 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 SPAG4Q9NPE6 437 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 NEK3P51956 506 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 SP2Q02086 613 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 SEMA5AQ13591 1074 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 CYP51A1Q16850 503 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 TFAP2DQ7Z6R9 452 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 PLEKHH3Q7Z736 793 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 LZICQ8WZA0 190 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 PPP1R10Q96QC0 940 aaKnown RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 SEPHS2Q99611 448 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 C9orf16Q9BUW7 83 aa14.95□□□□□ -0.02
TCOF1-201ENST00000323668 GATA5Q9BWX5 397 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-201ENST00000323668 LDLRP01130 860 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 HNRNPLP14866 589 aaKnown RBP eCLIP14.94□□□□□ -0.02
TCOF1-201ENST00000323668 TWF1Q12792 350 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 SQLEQ14534 574 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 C16orf72Q14CZ0 275 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ARL13AQ5H913 290 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-201ENST00000323668 FAM182AQ5T1J6 154 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ANKS6Q68DC2 871 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 BTBD9Q96Q07 612 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 KCTD14Q9BQ13 255 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ZCWPW1Q9H0M4 648 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 DERAQ9Y315 318 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 UBR2Q8IWV8 1755 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 CLDN5O00501 218 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 CYP2C18P33260 490 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 GRIA3P42263 894 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 RAP1GDS1P52306 607 aa14.94□□□□□ -0.02
TCOF1-201ENST00000323668 ADARP55265 1226 aaKnown RBP14.94□□□□□ -0.02
TCOF1-201ENST00000323668 TREML2Q5T2D2 321 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms