RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 PLGP00747 810 aaPredicted RBP12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 CLUP10909 449 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 CASP6P55212 293 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 BNC1Q01954 994 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 SLC18A3Q16572 532 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 C4orf22Q6V702 233 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 LRRC40Q9H9A6 602 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 HPS5Q9UPZ3 1129 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 SDR42E2A6NKP2 422 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 NR6A1Q15406 480 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 KBTBD12Q3ZCT8 623 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 PAGE2BQ5JRK9 111 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 BRI3BPQ8WY22 251 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 NUSAP1Q9BXS6 441 aaKnown RBP12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 TNKS2Q9H2K2 1166 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 INPPL1O15357 1258 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 ZC3H14Q6PJT7 736 aaKnown RBP12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 USP49Q70CQ1 688 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 SV2AQ7L0J3 742 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 PLPPR4Q7Z2D5 763 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 PHF21BQ96EK2 531 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 AGPAT5Q9NUQ2 364 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 A0A1W2PRU2 124 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 ENO4A6NNW6 628 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 TCP11X1B4DZS4 312 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 E5RJQ4 531 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 M0R3G1 203 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 BTN3A1O00481 513 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 GUCY1A3Q02108 690 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 CCDC81Q6ZN84 652 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 ZYG11BQ9C0D3 744 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 CCDC134Q9H6E4 229 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 PARVBQ9HBI1 364 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 OR12D3Q9UGF7 316 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 FAM153AQ9UHL3 310 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 CD84Q9UIB8 345 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 KCNK1O00180 336 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 TRUB2O95900 331 aaKnown RBP12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 VSIG10LQ86VR7 867 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 B3GALT6Q96L58 329 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 RABGEF1Q9UJ41 708 aa12.5□□□□□ -0.41
CACNA1F-201ENST00000323022 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 TEX28O15482 410 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 SLITRK3O94933 977 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 CCDC92Q53HC0 331 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 TCEAL5Q5H9L2 206 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 OTOP1Q7RTM1 612 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 UGT2B4P06133 528 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 PLOD1Q02809 727 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 CREB5Q02930 508 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 ITGA9Q13797 1035 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 WDR45BQ5MNZ6 344 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 ADCY4Q8NFM4 1077 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 LDAHQ9H6V9 325 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 POLR1BQ9H9Y6 1135 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 IL17RBQ9NRM6 502 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 GMIPQ9P107 970 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 SOX13Q9UN79 622 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 SNRPAP09012 282 aaKnown RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 GLRA2P23416 452 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 CSTF2P33240 577 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 C16orf46Q6P387 395 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 DAGLBQ8NCG7 672 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 TRPC4APQ8TEL6 797 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 ANKRD7Q92527 254 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 ELL3Q9HB65 397 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 MAT2BQ9NZL9 334 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 PSME2Q9UL46 239 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 SEC22BO75396 215 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 KLHL2O95198 593 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 MT-CO1P00395 513 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 KRT6AP02538 564 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 KRT6BP04259 564 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 PIRTP0C851 137 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 KRT6CP48668 564 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 LRRC36Q1X8D7 754 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 ZNF618Q5T7W0 954 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 C18orf25Q96B23 403 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 KIF1AQ12756 1690 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 COL3A1P02461 1466 aaPredicted RBP12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 C9J4A7 227 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 FGRP09769 529 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 GALNT3Q14435 633 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 WLSQ5T9L3 541 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 SPOCD1Q6ZMY3 1216 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 MICU2Q8IYU8 434 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 IL22RA1Q8N6P7 574 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 SLC5A5Q92911 643 aa12.49□□□□□ -0.41
CACNA1F-201ENST00000323022 PRDM16Q9HAZ2 1276 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms