RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 IFRD2Q12894 506 aaPredicted RBP18.18■□□□□ 0.5
PRKCB-202ENST00000321728 STXBP2Q15833 593 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 GK5Q6ZS86 529 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 FIBCD1Q8N539 461 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 ACVR1CQ8NER5 493 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 TRPC4APQ8TEL6 797 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 ISOC1Q96CN7 298 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 PDZD7Q9H5P4 517 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 SLC39A10Q9ULF5 831 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 SLC8A2Q9UPR5 921 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.18■□□□□ 0.5
PRKCB-202ENST00000321728 COL11A1P12107 1806 aaPredicted RBP18.18■□□□□ 0.5
PRKCB-202ENST00000321728 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 PHKA2P46019 1235 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 SLC5A3P53794 718 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 RALGDSQ12967 914 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 GLRA4Q5JXX5 417 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 ELMSAN1Q6PJG2 1045 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 CCDC185Q8N715 623 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 TEPSINQ96N21 525 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 TSNARE1Q96NA8 513 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 NT5C1AQ9BXI3 368 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 CDT1Q9H211 546 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 LRRC40Q9H9A6 602 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 VTI1BQ9UEU0 232 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 MID2Q9UJV3 735 aa18.18■□□□□ 0.5
PRKCB-202ENST00000321728 ZNF487B1APH4 448 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 E7ENX8 843 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 HTRA2O43464 458 aaPredicted RBP18.17■□□□□ 0.5
PRKCB-202ENST00000321728 CKMT2P17540 419 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 CCR3P51677 355 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 RHDQ02161 417 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 MXD4Q14582 209 aaPredicted RBP18.17■□□□□ 0.5
PRKCB-202ENST00000321728 KIZQ2M2Z5 673 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 PPP1R26Q5T8A7 1209 aaPredicted RBP18.17■□□□□ 0.5
PRKCB-202ENST00000321728 ZBTB49Q6ZSB9 765 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 HM13Q8TCT9 377 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 TRAPPC12Q8WVT3 735 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 C12orf43Q96C57 262 aaKnown RBP18.17■□□□□ 0.5
PRKCB-202ENST00000321728 PAIP1Q9H074 479 aaKnown RBP18.17■□□□□ 0.5
PRKCB-202ENST00000321728 PTPRHQ9HD43 1115 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 VPS45Q9NRW7 570 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 TLK1Q9UKI8 766 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 CLEC11AQ9Y240 323 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 SNX9Q9Y5X1 595 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 TMEM221A6NGB7 291 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 MFSD11O43934 449 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 BMP10O95393 424 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 ARL4AP40617 200 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 PSMD7P51665 324 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 ZYG11AQ6WRX3 759 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 ANKRD23Q86SG2 305 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 ZNF786Q8N393 782 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 DNAAF3Q8N9W5 541 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 LPGAT1Q92604 370 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 PFDN4Q9NQP4 134 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 TBC1D23Q9NUY8 699 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 PCDHGA7Q9Y5G6 932 aa18.17■□□□□ 0.5
PRKCB-202ENST00000321728 HACD1B0YJ81 288 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 TMEM233B4DJY2 109 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 GOLGA8TH3BQL2 631 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 ACKR2O00590 384 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 CBFA2T3O75081 653 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 C8BP07358 591 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 FAM160B1Q5W0V3 765 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 GPR180Q86V85 440 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 NIM1KQ8IY84 436 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 LZTR1Q8N653 840 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 CCNYL1Q8N7R7 359 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 THAP11Q96EK4 314 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 APBA2Q99767 749 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 C2orf40Q9H1Z8 148 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 SUCOQ9UBS9 1254 aaKnown RBP18.16■□□□□ 0.5
PRKCB-202ENST00000321728 IGKV6D-21A0A0A0MT36 114 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 SLCO1B7G3V0H7 640 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 PSMD12O00232 456 aaPredicted RBP18.16■□□□□ 0.5
PRKCB-202ENST00000321728 PORP16435 677 aaPredicted RBP18.16■□□□□ 0.5
PRKCB-202ENST00000321728 HK2P52789 917 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 MPP3Q13368 585 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 DGKDQ16760 1214 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 PID1Q7Z2X4 250 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 TTC30AQ86WT1 665 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 CLEC4CQ8WTT0 213 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 ACAD9Q9H845 621 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 ZNF214Q9UL59 606 aaPredicted RBP18.16■□□□□ 0.5
PRKCB-202ENST00000321728 CDC14AQ9UNH5 594 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 FIS1Q9Y3D6 152 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 PHGDHO43175 533 aaKnown RBP18.16■□□□□ 0.5
PRKCB-202ENST00000321728 TIMM44O43615 452 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 APOA4P06727 396 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 STAG3L1P0CL83 205 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 UBA1P22314 1058 aaKnown RBP18.16■□□□□ 0.5
PRKCB-202ENST00000321728 ATICP31939 592 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 NSUN2Q08J23 767 aaKnown RBP eCLIP18.16■□□□□ 0.5
PRKCB-202ENST00000321728 KCTD21Q4G0X4 260 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 TREML2Q5T2D2 321 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 SMYD5Q6GMV2 418 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 ZNF567Q8N184 647 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 SLCO4A1Q96BD0 722 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 MFSD3Q96ES6 412 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms