RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 NFKBIEO00221 500 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 TIGD7Q6NT04 549 aaPredicted RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 RFWD3Q6PCD5 774 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 HSFY1Q96LI6 401 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 AGAP2Q99490 1192 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 TXNRD2Q9NNW7 524 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 RIC8BQ9NVN3 520 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 C2CD2Q9Y426 696 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 MAFBQ9Y5Q3 323 aaPredicted RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 NRCAMQ92823 1304 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 SYNCRIPO60506 623 aaKnown RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 RBP1P09455 135 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ABL2P42684 1182 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 RFX3P48380 749 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 PIK3CGP48736 1102 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 RPL14P50914 215 aaKnown RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 PSMD5Q16401 504 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 KHDC1Q4VXA5 237 aaKnown RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF280DQ6N043 979 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 NPAS2Q99743 824 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 EBF4Q9BQW3 602 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 TRPM5Q9NZQ8 1165 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 KANSL1LA0AUZ9 987 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 NCAM2O15394 837 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ADRA1BP35368 520 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 GRIA3P42263 894 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 FCGRTP55899 365 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 CYP51A1Q16850 503 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 MFSD5Q6N075 450 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 KYAT3Q6YP21 454 aaKnown RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 FAM35AQ86V20 835 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ULK2Q8IYT8 1036 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 SLC44A1Q8WWI5 657 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 NKD2Q969F2 451 aaPredicted RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 PIWIL1Q96J94 861 aaKnown RBP16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ZNF670Q9BS34 389 aa16.73■□□□□ 0.27
CLIP4-201ENST00000320081 ABHD2P08910 425 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 TPBGLP0DKB5 382 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 CSH1P0DML2 217 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 CSH2P0DML3 217 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 AKR1A1P14550 325 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 HDAC4P56524 1084 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SPANXN3Q5MJ09 141 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 TAF2Q6P1X5 1199 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 GLT6D1Q7Z4J2 308 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SAPCD2Q86UD0 394 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 GFM2Q969S9 779 aaKnown RBP16.72■□□□□ 0.27
CLIP4-201ENST00000320081 ZNHIT2Q9UHR6 403 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 MSCO60682 206 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 GMPRP36959 345 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 HALP42357 657 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 CCDC142Q17RM4 750 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SPDYCQ5MJ68 293 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 LCLAT1Q6UWP7 414 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 STK32CQ86UX6 486 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 CIR1Q86X95 450 aaPredicted RBP16.72■□□□□ 0.27
CLIP4-201ENST00000320081 ZDHHC17Q8IUH5 632 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 PTGR2Q8N8N7 351 aaPredicted RBP16.72■□□□□ 0.27
CLIP4-201ENST00000320081 KCTD15Q96SI1 283 aaPredicted RBP16.72■□□□□ 0.27
CLIP4-201ENST00000320081 DYRK4Q9NR20 520 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SAR1AQ9NR31 198 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 WASF2Q9Y6W5 498 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 ARID1BQ8NFD5 2236 aaPredicted RBP16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SPDYE5A6NIY4 337 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SPATA31D3P0C874 917 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 ELNP15502 786 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 EPB42P16452 691 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 PBX3P40426 434 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 CHRNA4P43681 627 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SNX17Q15036 470 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SPDYE7PQ495Y7 208 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 TMEM63BQ5T3F8 832 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 IQSEC1Q6DN90 963 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 PPP4R4Q6NUP7 873 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 SPATA31D4Q6ZUB0 917 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 CYP2S1Q96SQ9 504 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 ZFP14Q9HCL3 533 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 UXTQ9UBK9 157 aaPredicted RBP16.72■□□□□ 0.27
CLIP4-201ENST00000320081 RABGEF1Q9UJ41 708 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 CROTQ9UKG9 612 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 PCDHB5Q9Y5E4 795 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 ACTL7BQ9Y614 415 aa16.72■□□□□ 0.27
CLIP4-201ENST00000320081 TTC24A2A3L6 582 aaPredicted RBP16.71■□□□□ 0.27
CLIP4-201ENST00000320081 TMEM247A6NEH6 219 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
CLIP4-201ENST00000320081 MYL4P12829 197 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 RALGDSQ12967 914 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 XRCC4Q13426 336 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 FAM126BQ8IXS8 530 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 NTPCRQ9BSD7 190 aaKnown RBP16.71■□□□□ 0.27
CLIP4-201ENST00000320081 COLEC11Q9BWP8 271 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 NEMP2A6NFY4 417 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 BTBD19C9JJ37 291 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 GSC2O15499 205 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 FKBP6O75344 327 aa16.71■□□□□ 0.27
CLIP4-201ENST00000320081 LRPAP1P30533 357 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms