RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SERPINA6P08185 405 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 NOS2P35228 1153 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 TPI1P60174 286 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 RABGAP1LQ5R372 815 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 NUDCD3Q8IVD9 361 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 CEP70Q8NHQ1 597 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 MIPOL1Q8TD10 442 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 ZNF778Q96MU6 729 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 TMEM209Q96SK2 561 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 TDRKHQ9Y2W6 561 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 CCNT2O60583 730 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 LYPLA1O75608 230 aaPredicted RBP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 ZMPSTE24O75844 475 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 KRT38O76015 456 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 C1QAP02745 245 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 KCNA4P22459 653 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 AXLP30530 894 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 TUBB3Q13509 450 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 SH2D4BQ5SQS7 431 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 PGM2L1Q6PCE3 622 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 STRADAQ7RTN6 431 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 FAM35AQ86V20 835 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 SCAMP5Q8TAC9 235 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 RTP4Q96DX8 246 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 HSPBAP1Q96EW2 488 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 SENP6Q9GZR1 1112 aaPredicted RBP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 CIDEBQ9UHD4 219 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 APPL1Q9UKG1 709 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 ZNF232Q9UNY5 417 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 POMPQ9Y244 141 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 A0A1B0GTW7 788 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 DNAJA2O60884 412 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 HNRNPCP07910 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 FUT4P22083 530 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 CTGFP29279 349 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 SLC5A2P31639 672 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 FDFT1P37268 417 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 MRPS6P82932 125 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 CACNB2Q08289 660 aaPredicted RBP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 TIGD5Q53EQ6 642 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 LGSNQ5TDP6 509 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 KLC3Q6P597 504 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 IYDQ6PHW0 289 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 ATG14Q6ZNE5 492 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 NPWQ8N729 165 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 TRPV1Q8NER1 839 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 PPP1R10Q96QC0 940 aaKnown RBP15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 ZIC5Q96T25 663 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 ZNF358Q9NW07 568 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 NDUFA13Q9P0J0 144 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 SIRPGQ9P1W8 387 aa15.85■□□□□ 0.13
SHROOM1-201ENST00000319854 CHRNA1P02708 482 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 AOC1P19801 751 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 NR2C2P49116 596 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 RPL10AP62906 217 aaKnown RBP15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 ICA1LQ8NDH6 482 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 ZMIZ2Q8NF64 920 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 CATSPER2Q96P56 530 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 CDH22Q9UJ99 828 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 USP3Q9Y6I4 520 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 LOC100653049A0A140TA62 436 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 H3BSA7 217 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 HAS3O00219 553 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 ITM2AO43736 263 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 KRT34O76011 436 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 CD1EP15812 388 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 CMC1Q7Z7K0 106 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 CRLF3Q8IUI8 442 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 SPNS2Q8IVW8 549 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 TRIM42Q8IWZ5 723 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 AGR3Q8TD06 166 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 NPY6RQ99463 290 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 TKTL2Q9H0I9 626 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 TXNDC16Q9P2K2 825 aa15.84■□□□□ 0.13
SHROOM1-201ENST00000319854 SPAG6O75602 509 aa15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 MOCS2O96007 188 aaPredicted RBP15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 ITGB1P05556 798 aa15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 OR4Q2P0C623 313 aa15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 WARSP23381 471 aaKnown RBP15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 ADRA1BP35368 520 aa15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 MYBPC1Q00872 1141 aa15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 WASHC5Q12768 1159 aa15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 TOP6BLQ8N6T0 577 aa15.83■□□□□ 0.13
SHROOM1-201ENST00000319854 TPP1O14773 563 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 SNNO75324 88 aaPredicted RBP15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 DAB1O75553 588 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 SH3BGRP55822 239 aaPredicted RBP15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 MAP3K21Q5TCX8 1036 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 SDHAF4Q5VUM1 108 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 AGMOQ6ZNB7 445 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 RSPH3Q86UC2 560 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 MOCOSQ96EN8 888 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 DGKIO75912 1065 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 ALDH1A3P47895 512 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 CRHR2Q13324 411 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 DEFB107AQ8IZN7 70 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 ZNF669Q96BR6 464 aaPredicted RBP15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 DCUN1D1Q96GG9 259 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 CNBD2Q96M20 576 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms