RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 NUMA1Q14980 2115 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 ANKRD62A6NC57 917 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 C2CD4BA6NLJ0 364 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 H0Y8X5 98 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 CBX4O00257 560 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 LATO43561 262 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 PLRG1O43660 514 aaKnown RBP18.17■□□□□ 0.5
TPM1-203ENST00000317516 MAGEC1O60732 1142 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 RTN2O75298 545 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 PRNPP04156 253 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 CHRNA3P32297 505 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 PTPN9P43378 593 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 NRG1Q02297 640 aaPredicted RBP18.17■□□□□ 0.5
TPM1-203ENST00000317516 CNTN1Q12860 1018 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 CDO1Q16878 200 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 CLEC16AQ2KHT3 1053 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 LAYNQ6UX15 382 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 PHLDB2Q86SQ0 1253 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 PHF13Q86YI8 300 aaPredicted RBP18.17■□□□□ 0.5
TPM1-203ENST00000317516 OR2A12Q8NGT7 310 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 ELF4Q99607 663 aaPredicted RBP18.17■□□□□ 0.5
TPM1-203ENST00000317516 OSBPL2Q9H1P3 480 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 EBF2Q9HAK2 575 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 ATP13A1Q9HD20 1204 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 GDF3Q9NR23 364 aa18.17■□□□□ 0.5
TPM1-203ENST00000317516 ADAMTS9Q9P2N4 1935 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 FAM221BA6H8Z2 402 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 C10orf142B7Z368 130 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 YKT6O15498 198 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 RRM1P23921 792 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 ARRB1P49407 418 aaPredicted RBP18.16■□□□□ 0.5
TPM1-203ENST00000317516 GSCP56915 257 aaPredicted RBP18.16■□□□□ 0.5
TPM1-203ENST00000317516 GNA12Q03113 381 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 TYRO3Q06418 890 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 C15orf59Q2T9L4 293 aaPredicted RBP18.16■□□□□ 0.5
TPM1-203ENST00000317516 POM121L1PQ3SYA9 428 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 KCNT1Q5JUK3 1230 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 NAPEPLDQ6IQ20 393 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 RWDD4Q6NW29 188 aaKnown RBP18.16■□□□□ 0.5
TPM1-203ENST00000317516 NEK5Q6P3R8 708 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 LINGO4Q6UY18 593 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 TRIM69Q86WT6 500 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 KDF1Q8NAX2 398 aaPredicted RBP18.16■□□□□ 0.5
TPM1-203ENST00000317516 OR7D4Q8NG98 312 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 GATA6Q92908 595 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 PCDHB18PQ96TA0 734 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 CEP44Q9C0F1 390 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 PREBQ9HCU5 417 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 KLK13Q9UKR3 277 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 KNL1Q8NG31 2342 aa18.16■□□□□ 0.5
TPM1-203ENST00000317516 A0A1B0GTQ1 180 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 CXorf51AA0A1B0GTR3 108 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 A0A1W2PR77 199 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 K7ERQ8 282 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 TLR4O00206 839 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 PLK4O00444 970 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 KPNA3O00505 521 aaPredicted RBP18.15■□□□□ 0.5
TPM1-203ENST00000317516 TNFSF14O43557 240 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 FERP16591 822 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 RHOQP17081 205 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 DESP17661 470 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 METAP1P53582 386 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 C1QBPQ07021 282 aaKnown RBP18.15■□□□□ 0.5
TPM1-203ENST00000317516 OVGP1Q12889 678 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 STAT4Q14765 748 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 NCAPHQ15003 741 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 SETMARQ53H47 684 aaPredicted RBP18.15■□□□□ 0.5
TPM1-203ENST00000317516 AGBL4Q5VU57 503 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 DRC7Q8IY82 874 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 OXR1Q8N573 874 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 AOPEPQ8N6M6 819 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 MFSD2AQ8NA29 543 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 C3orf20Q8ND61 904 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 JOSD2Q8TAC2 188 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 FAM172AQ8WUF8 416 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 CENPIQ92674 756 aaPredicted RBP18.15■□□□□ 0.5
TPM1-203ENST00000317516 PPP1R16AQ96I34 528 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 AGPAT1Q99943 283 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 IL36AQ9UHA7 158 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 HPCAL4Q9UM19 191 aa18.15■□□□□ 0.5
TPM1-203ENST00000317516 MAP1BP46821 2468 aaKnown RBP18.14■□□□□ 0.5
TPM1-203ENST00000317516 SIGLEC16A6NMB1 481 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 PRAMEF26H0Y7S4 382 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 SMAD6O43541 496 aaKnown RBP18.14■□□□□ 0.49
TPM1-203ENST00000317516 RNGTTO60942 597 aaKnown RBP18.14■□□□□ 0.49
TPM1-203ENST00000317516 KRT37O76014 449 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 WNT1P04628 370 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 GPD1P21695 349 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 MAT2AP31153 395 aaKnown RBP18.14■□□□□ 0.49
TPM1-203ENST00000317516 RFC1P35251 1148 aaPredicted RBP18.14■□□□□ 0.49
TPM1-203ENST00000317516 MAPKAPK2P49137 400 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 SERPINH1P50454 418 aaKnown RBP18.14■□□□□ 0.49
TPM1-203ENST00000317516 GEMIN4P57678 1058 aaKnown RBP18.14■□□□□ 0.49
TPM1-203ENST00000317516 PPP2CBP62714 309 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 PPP2CAP67775 309 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 PTP4A2Q12974 167 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 FILIP1LQ4L180 1135 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 PPP1R2P3Q6NXS1 205 aa18.14■□□□□ 0.49
TPM1-203ENST00000317516 C22orf39Q6P5X5 142 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms