RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 NPLOC4Q8TAT6 608 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 CNDP1Q96KN2 507 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 TSPAN18Q96SJ8 248 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 AVENQ9NQS1 362 aaPredicted RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 MYH11P35749 1972 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 SEC22BO75396 215 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 CATP04040 527 aaKnown RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 MATKP42679 507 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 IL2P60568 153 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 NRDE2Q9H7Z3 1164 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 ZSCAN5CA6NGD5 496 aaPredicted RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 ATP4AP20648 1035 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 ABCG1P45844 678 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 ZACNQ401N2 412 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 RFWD3Q6PCD5 774 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 KCNK16Q96T55 309 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 ZNF682O95780 498 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 RPA3P35244 121 aaPredicted RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 PARP6Q2NL67 630 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 TRIM60Q495X7 471 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 ARSHQ5FYA8 562 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 NT5DC1Q5TFE4 455 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 METTL3Q86U44 580 aaKnown RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 MID1IP1Q9NPA3 183 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 MYH10P35580 1976 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 EIF4E1BA6NMX2 242 aaKnown RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 PPP1R37O75864 691 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 BAIAP3O94812 1187 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 NFYCQ13952 458 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 AADACL2Q6P093 401 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 CEP70Q8NHQ1 597 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 METTL6Q8TCB7 284 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 RERGLQ9H628 205 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 NMRAL1Q9HBL8 299 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 NOP53Q9NZM5 478 aaKnown RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 OPTCQ9UBM4 332 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 ENTPD4Q9Y227 616 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 SDK1Q7Z5N4 2213 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 ZSCAN5DPP0CG00 497 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 DGKAP23743 735 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 CRABP2P29373 138 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 DNAL1Q4LDG9 190 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 FAM151BQ6UXP7 276 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 SUGP1Q8IWZ8 645 aaKnown RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 FAM9CQ8IZT9 166 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 HGH1Q9BTY7 390 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 EPN3Q9H201 632 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 MAFBQ9Y5Q3 323 aaPredicted RBP13.69□□□□□ -0.22
RFFL-201ENST00000315249 ZNF536O15090 1300 aa13.69□□□□□ -0.22
RFFL-201ENST00000315249 RAD23BP54727 409 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 REPS1Q96D71 796 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 SLC27A6Q9Y2P4 619 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 APOC4-APOC2K7ER74 178 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 APOC2P02655 101 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 SLC35G4P0C7Q5 338 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 BSNDQ8WZ55 320 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 WRAP53Q9BUR4 548 aaKnown RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 IMPAD1Q9NX62 359 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 GABRQQ9UN88 632 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 LOC102724159A0A0B4J2E5 919 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 ICAM3P32942 547 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 GP5P40197 560 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 GPR15P49685 360 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 PWP2Q15269 919 aaKnown RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 FBXW10Q5XX13 1052 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 MYCBPAPQ8TBZ2 947 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 CPNE1Q99829 537 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 IMP3Q9NV31 184 aaKnown RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 RABGGTBP53611 331 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 STX5Q13190 355 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 PDLIM2Q96JY6 352 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 NIFKQ9BYG3 293 aaKnown RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 DPY30Q9C005 99 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 IL22Q9GZX6 179 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 ZNF214Q9UL59 606 aaPredicted RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 MYH13Q9UKX3 1938 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 SH3BGRP55822 239 aaPredicted RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 POLE2P56282 527 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 TMEM63BQ5T3F8 832 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 REXO1L1PQ8IX06 675 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 ARMC7Q9H6L4 198 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 CREBZFQ9NS37 354 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 TMCC3Q9ULS5 477 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 ATRNO75882 1429 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 OR10H2O60403 315 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 SNHG28P0DPA3 235 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 ETS1P14921 441 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 PRKAG1P54619 331 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 CYP4F8P98187 520 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 SPIDRQ14159 915 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 LINGO4Q6UY18 593 aa13.68□□□□□ -0.22
RFFL-201ENST00000315249 RSPH9Q9H1X1 276 aaPredicted RBP13.68□□□□□ -0.22
RFFL-201ENST00000315249 GANQ9H2C0 597 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms