RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SLC41A1Q8IVJ1 513 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 CCNYL1Q8N7R7 359 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPN2-201ENST00000309660 SLC39A8Q9C0K1 460 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 CHST12Q9NRB3 414 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 TTC24A2A3L6 582 aaPredicted RBP11.75□□□□□ -0.53
PTPN2-201ENST00000309660 C9IYK1 514 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 CHRNGP07510 517 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 CCR1P32246 355 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 GJA9P57773 515 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 CNGA3Q16281 694 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 SPDYAQ5MJ70 313 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 KCTD4Q8WVF5 259 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 OMDQ99983 421 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 TLE6Q9H808 572 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 NMUR1Q9HB89 426 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 SLC2A6Q9UGQ3 507 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 Q9Y3F1 56 aa11.75□□□□□ -0.53
PTPN2-201ENST00000309660 A0A1W2PQH9 124 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 CAPN14A8MX76 684 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 SIN3BO75182 1162 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 TBX10O75333 385 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 SOAT2O75908 522 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 PSMG1O95456 288 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 PRKCGP05129 697 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 GRK2P25098 689 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 GRK4P32298 578 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 TUSC3Q13454 348 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 TSNAXIP1Q2TAA8 658 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 RALGPS1Q5JS13 557 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 PDPK2PQ6A1A2 396 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ZNF280BQ86YH2 543 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 SREK1Q8WXA9 508 aaKnown RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 B3GALT6Q96L58 329 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 SORT1Q99523 831 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 WDR55Q9H6Y2 383 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 PRDM16Q9HAZ2 1276 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 RRN3Q9NYV6 651 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 IRAK2O43187 625 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 TIMM44O43615 452 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 IL1BP01584 269 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 GNAZP19086 355 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 IDH3AP50213 366 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 COG7P83436 770 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 LPIN1Q14693 890 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 LRRC36Q1X8D7 754 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 RGMBQ6NW40 437 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 MAVSQ7Z434 540 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 C14orf80Q86SX3 495 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ULK2Q8IYT8 1036 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ZSCAN18Q8TBC5 510 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 DNAJC9Q8WXX5 260 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ZNF419Q96HQ0 510 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 KLHL5Q96PQ7 755 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 TBL1YQ9BQ87 522 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 CCDC106Q9BWC9 280 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 COG4Q9H9E3 785 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ABT1Q9ULW3 272 aaKnown RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 RUVBL2Q9Y230 463 aaKnown RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 A0A0U1RQF3 1178 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 CCL22O00626 93 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 CCND3P30281 292 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 HCAR3P49019 387 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 NPY2RP49146 381 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 NAGLUP54802 743 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 PRKCZQ05513 592 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 NAB1Q13506 487 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 CUL3Q13618 768 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 KCTD11Q693B1 232 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ZNF280DQ6N043 979 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 RIPOR1Q6ZS17 1223 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 RAB3IL1Q8TBN0 382 aa11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
PTPN2-201ENST00000309660 ERI2A8K979 691 aaKnown RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 TBX18O95935 607 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 MPSTP25325 297 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 HOXC8P31273 242 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 SERPINB5P36952 375 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 ETFBP38117 255 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 EFEMP1Q12805 493 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 CCDC153Q494R4 210 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 ZNF470Q6ECI4 717 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 PHTF2Q8N3S3 785 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 TDRD5Q8NAT2 981 aaKnown RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 PGAP3Q96FM1 320 aaPredicted RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 VAT1Q99536 393 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 NDNQ99608 321 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 CSNK1G1Q9HCP0 422 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 ABCC13Q9NSE7 274 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 NMRK1Q9NWW6 199 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 SLC7A8Q9UHI5 535 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 SOX13Q9UN79 622 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 TRIM13O60858 407 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 SORBS2O94875 1100 aaKnown RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 LMNAP02545 664 aaKnown RBP11.73□□□□□ -0.53
PTPN2-201ENST00000309660 AHSGP02765 367 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 COPAP53621 1224 aa11.73□□□□□ -0.53
PTPN2-201ENST00000309660 SLC12A2P55011 1212 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms