RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TMEM132CQ8N3T6 1108 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 GIPC3Q8TF64 312 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 C19orf60Q96EN9 201 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 YARS2Q9Y2Z4 477 aaKnown RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 CRTAMO95727 393 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 PRG2P13727 222 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 HOXD10P28358 340 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 CTBP1Q13363 440 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 ARHGAP15Q53QZ3 475 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 TMEM63BQ5T3F8 832 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 ING5Q8WYH8 240 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 VPS33AQ96AX1 596 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 PDE2AO00408 941 aaPredicted RBP12.81□□□□□ -0.36
USP38-201ENST00000307017 OGTO15294 1046 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 INMTO95050 263 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 MPOP05164 745 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 BEX3Q00994 111 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 HSPA14Q0VDF9 509 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 NEK5Q6P3R8 708 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 TMPRSS6Q8IU80 811 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 ARMC8Q8IUR7 673 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 DAW1Q8N136 415 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 ACAT2Q9BWD1 397 aa12.81□□□□□ -0.36
USP38-201ENST00000307017 OR5F1O95221 314 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 SEC24AO95486 1093 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 ANPEPP15144 967 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GRTP1Q5TC63 336 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GMCL1Q96IK5 515 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 SLC38A7Q9NVC3 462 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 PTGFRNQ9P2B2 879 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 IFNA16P05015 189 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 PAPD7Q5XG87 772 aaKnown RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 KCNT2Q6UVM3 1135 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 CMTM6Q9NX76 183 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 LNPEPQ9UIQ6 1025 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 ABHD14A-ACY1A0A1B0GW23 586 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 TSPAN4O14817 238 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 RGL2O15211 777 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 ICAM3P32942 547 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GRIA4P48058 902 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 VWA5B1Q5TIE3 1220 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GPSM1Q86YR5 675 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 AHCYL2Q96HN2 611 aaKnown RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 KLHL32Q96NJ5 620 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 ARL15Q9NXU5 204 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 SLC27A5Q9Y2P5 690 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GPSM3Q9Y4H4 160 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GPC6Q9Y625 555 aaPredicted RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 RCCD1A6NED2 376 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 PTENP60484 403 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 FAM171A1Q5VUB5 890 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 TSPAN14Q8NG11 270 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 NKD1Q969G9 470 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GTF3C4Q9UKN8 822 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 CST1P01037 141 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GPR15P49685 360 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 BCAT1P54687 386 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 STXBP1P61764 594 aaKnown RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 RPL38P63173 70 aaKnown RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 KYAT1Q16773 422 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 STRIP1Q5VSL9 837 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 LDB1Q86U70 411 aaPredicted RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 OFCC1Q8IZS5 231 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 DEFB106AQ8N104 65 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 GPRC5AQ8NFJ5 357 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 HTR3CQ8WXA8 447 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 ATL1Q8WXF7 558 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 LPPQ93052 612 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 TRNT1Q96Q11 434 aaKnown RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 AGO4Q9HCK5 861 aaKnown RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 INO80Q9ULG1 1556 aaPredicted RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 HBP1O60381 514 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 TSPAN9O75954 239 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 TOR1AIP1Q5JTV8 583 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 RASSF6Q6ZTQ3 369 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 C8orf59Q8N0T1 100 aaPredicted RBP12.8□□□□□ -0.36
USP38-201ENST00000307017 LNX2Q8N448 690 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 OR7A2PQ8NGA2 310 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 CERS2Q96G23 380 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 NMRAL1Q9HBL8 299 aa12.8□□□□□ -0.36
USP38-201ENST00000307017 ITGALP20701 1170 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 RPL4P36578 427 aaKnown RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 GSTCDQ8NEC7 633 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 NOL11Q9H8H0 719 aaKnown RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 IFRD1O00458 451 aaPredicted RBP12.79□□□□□ -0.36
USP38-201ENST00000307017 TMCC2O75069 709 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 PROSCO94903 275 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 GHRP10912 638 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 VDRP11473 427 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 ME2P23368 584 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 RAP1GAP2Q684P5 730 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 SV2AQ7L0J3 742 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 ANKS1BQ7Z6G8 1248 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 C12orf29Q8N999 325 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 OR52J3Q8NH60 311 aa12.79□□□□□ -0.36
USP38-201ENST00000307017 RCN3Q96D15 328 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms