RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ARF5P84085 180 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SFSWAPQ12872 951 aaKnown RBP11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SIM2Q14190 667 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ELAVL3Q14576 367 aaKnown RBP11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 GSE1Q14687 1217 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DLG2Q15700 870 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ATP13A4Q4VNC1 1196 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 LRRC38Q5VT99 294 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 Q6ZVU0 165 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SYCE1Q8N0S2 351 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 NKD2Q969F2 451 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 HMCESQ96FZ2 354 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MRGPRX1Q96LB2 322 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ACE2Q9BYF1 805 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CEP44Q9C0F1 390 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SLC6A17Q9H1V8 727 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PRSS16Q9NQE7 514 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 HYOU1Q9Y4L1 999 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ALG6Q9Y672 507 aa11.23□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RCCD1A6NED2 376 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 C1QTNF3-AMACRE9PGA6 284 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DCLK1O15075 740 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ALOX15BO15296 676 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MAP3K13O43283 966 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ADH1BP00325 375 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CD48P09326 243 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 AMPD1P23109 780 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 KDELR1P24390 212 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PSMD8P48556 350 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DNA2P51530 1060 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ZBTB16Q05516 673 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MMRN1Q13201 1228 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SRSF5Q13243 272 aaKnown RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SERINC3Q13530 473 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ELF2Q15723 593 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ANKRD20A8PQ5CZ79 823 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 C9orf64Q5T6V5 341 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SLC36A4Q6YBV0 504 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CCDC50Q8IVM0 306 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 STK40Q8N2I9 435 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ATPAF2Q8N5M1 289 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PCDH20Q8N6Y1 951 aaKnown RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 FAM71BQ8TC56 605 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 FRS2Q8WU20 508 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 NSMCE1Q8WV22 266 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CASKIN2Q8WXE0 1202 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TSC1Q92574 1164 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PTPRN2Q92932 1015 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RBM41Q96IZ5 413 aaKnown RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ZNF830Q96NB3 372 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SLC39A8Q9C0K1 460 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 LACRTQ9GZZ8 138 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MKRN2Q9H000 416 aaKnown RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 EPC1Q9H2F5 836 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 GOLPH3Q9H4A6 298 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MTG2Q9H4K7 406 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 NOL6Q9H6R4 1146 aaKnown RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 LRRC19Q9H756 370 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CD248Q9HCU0 757 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 UBA2Q9UBT2 640 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SCML1Q9UN30 329 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CYP8B1Q9UNU6 501 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SMG5Q9UPR3 1016 aaKnown RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 NCKAP1Q9Y2A7 1128 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 FCF1Q9Y324 198 aaKnown RBP11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ADGRG1Q9Y653 693 aa11.22□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ZNF487B1APH4 448 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 K7ERQ8 282 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 NDUFS2O75306 463 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ZMPSTE24O75844 475 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RHOBTB1O94844 696 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TMCC1O94876 653 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MT-CO1P00395 513 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 IL1BP01584 269 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 LMNAP02545 664 aaKnown RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 OXTRP30559 389 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 P2RY2P41231 377 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 PAPOLAP51003 745 aaKnown RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ARSEP51690 589 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RHOAP61586 193 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RPS14P62263 151 aaKnown RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SNRPD1P62314 119 aaKnown RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CCZ1BP86790 482 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CCZ1P86791 482 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 CST6Q15828 149 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 FAM46CQ5VWP2 391 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 VSIG1Q86XK7 387 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RFX6Q8HWS3 928 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 MMAAQ8IVH4 418 aaKnown RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 BBS5Q8N3I7 341 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RYBPQ8N488 228 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 NPWQ8N729 165 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 KIAA1524Q8TCG1 905 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 GANCQ8TET4 914 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RLN3Q8WXF3 142 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ALS2CR12Q96Q35 445 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms