RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TPGS1Q6ZTW0 290 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 LPPQ93052 612 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 TMEM79Q9BSE2 394 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 IKZF4Q9H2S9 585 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 KLHL28Q9NXS3 571 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.16■□□□□ 0.18
USP42-201ENST00000306177 FAM50BQ9Y247 325 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 INPP4BO15327 924 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.16■□□□□ 0.18
USP42-201ENST00000306177 SAMD4BQ5PRF9 694 aaKnown RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 FAM45BPQ6NSW5 357 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 NECAB2Q7Z6G3 386 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 NKAPQ8N5F7 415 aaKnown RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 FAM45AQ8TCE6 357 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 HELQQ8TDG4 1101 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 HIC2Q96JB3 615 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 EPS8L2Q9H6S3 715 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 PTPRHQ9HD43 1115 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 VPS51Q9UID3 782 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 PEAK1Q9H792 1746 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 PRR23D1E9PI22 279 aaPredicted RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 GSTM1P09488 218 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 NUDT17P0C025 328 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 PRR23D2P0DMB1 279 aaPredicted RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 HPGDP15428 266 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 SERPINB1P30740 379 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 MAPK8P45983 427 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 RPS7P62081 194 aaKnown RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 PIWIL2Q8TC59 973 aaKnown RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 LTN1O94822 1766 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 KRT20P35900 424 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 FNDC3BQ53EP0 1204 aaKnown RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 SETMARQ53H47 684 aaPredicted RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 DCLRE1AQ6PJP8 1040 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 PALB2Q86YC2 1186 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 STARD8Q92502 1023 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 FAM84AQ96KN4 292 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.182e-7■■■■□ 23.4
USP42-201ENST00000306177 ZC4H2Q9NQZ6 224 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 BTBD7Q9P203 1132 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 TDRKHQ9Y2W6 561 aaKnown RBP16.16■□□□□ 0.18
USP42-201ENST00000306177 ZNF541Q9H0D2 1346 aa16.16■□□□□ 0.18
USP42-201ENST00000306177 ABCB1P08183 1280 aaPredicted RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 ARF4P18085 180 aaPredicted RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 CLCN5P51795 746 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 TAS2R40P59535 323 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SP3Q02447 781 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 GRIK3Q13003 919 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 PPP1R26Q5T8A7 1209 aaPredicted RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 GDPD5Q8WTR4 605 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 GPR20Q99678 358 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SENP6Q9GZR1 1112 aaPredicted RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 ALG9Q9H6U8 611 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 ARL15Q9NXU5 204 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 RABGEF1Q9UJ41 708 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SORCS3Q9UPU3 1222 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 ABCG1P45844 678 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 IL27RAQ6UWB1 636 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 TMEM26Q6ZUK4 368 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 C12orf29Q8N999 325 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CDRT15Q96T59 188 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 MLPHQ9BV36 600 aaPredicted RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 DUSP16Q9BY84 665 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 ZDHHC6Q9H6R6 413 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CNGB3Q9NQW8 809 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 FAM58BPP0C7Q3 252 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CSH1P0DML2 217 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CSH2P0DML3 217 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CD52P31358 61 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SOX6P35712 828 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SNX30Q5VWJ9 437 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 TMEM132CQ8N3T6 1108 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 LHX5Q9H2C1 402 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CNOT3O75175 753 aaKnown RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 LDLRP01130 860 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CHKAP35790 457 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 CREMQ03060 361 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 DUSP28Q4G0W2 176 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 STXBP5Q5T5C0 1151 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SLC41A1Q8IVJ1 513 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 EID3Q8N140 333 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 OR6Y1Q8NGX8 325 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SPPL2AQ8TCT8 520 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 UGT2B28Q9BY64 529 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 TRAV19A0A0A6YYK7 116 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 ZNF839A8K0R7 811 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 GPR15P49685 360 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 SNRPD1P62314 119 aaKnown RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 TRIP4Q15650 581 aaPredicted RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 ACMSDQ8TDX5 336 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 GLMNQ92990 594 aa16.15■□□□□ 0.18
USP42-201ENST00000306177 EBNA1BP2Q99848 306 aaKnown RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 SEMA4BQ9NPR2 832 aaPredicted RBP16.15■□□□□ 0.18
USP42-201ENST00000306177 SRRM3A6NNA2 597 aaPredicted RBP16.14■□□□□ 0.17
USP42-201ENST00000306177 FAM220BPB1ANY3 271 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 SLC9A3R1O14745 358 aaPredicted RBP16.14■□□□□ 0.17
USP42-201ENST00000306177 TMCO1Q9UM00 188 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 A8MX80 341 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 CCDC166P0CW27 439 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 ERCC2P18074 760 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms