RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 DAB2P98082 770 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 RAD51Q06609 339 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ACBD5Q5T8D3 534 aaPredicted RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 WSCD1Q658N2 575 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 FKBP9P1Q75LS8 142 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 ZNF781Q8N8C0 355 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 CMASQ8NFW8 434 aaPredicted RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 KCTD14Q9BQ13 255 aaPredicted RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 RGS18Q9NS28 235 aa13.49□□□□□ -0.25
DDX54-201ENST00000306014 PRG3Q9Y2Y8 225 aaPredicted RBP13.49□□□□□ -0.25
DDX54-201ENST00000306014 CHD4Q14839 1912 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ESRRBO95718 433 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 FESP07332 822 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 NPR3P17342 541 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 GTF2H3Q13889 308 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 FRG1Q14331 258 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 MARC1Q5VT66 337 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 PTRHD1Q6GMV3 140 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 PLPPR4Q7Z2D5 763 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 MPP5Q8N3R9 675 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 TRPM4Q8TD43 1214 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ALG9Q9H6U8 611 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 OLA1Q9NTK5 396 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 TRMT6Q9UJA5 497 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 POMPQ9Y244 141 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ZNF536O15090 1300 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ATRNL1Q5VV63 1379 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 HNRNPRO43390 633 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 CLASP2O75122 1294 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 PTPN1P18031 435 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 INPP1P49441 399 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 TUBP50607 506 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ATP1A4Q13733 1029 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 KCTD21Q4G0X4 260 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ATP6AP1LQ52LC2 224 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 PLD3Q8IV08 490 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 DSELQ8IZU8 1212 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 TNIP2Q8NFZ5 429 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 MFSD3Q96ES6 412 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 MAML3Q96JK9 1138 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 SEPT5Q99719 369 aaPredicted RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 CHCHD3Q9NX63 227 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 KANSL1LA0AUZ9 987 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 TRIM38O00635 465 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 TSPAN3O60637 253 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 CABYRO75952 493 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 CSE1LP55060 971 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 XIAPP98170 497 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 PCID2Q5JVF3 399 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 RELL1Q8IUW5 271 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 AZIN2Q96A70 460 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 DACT3Q96B18 629 aaPredicted RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 CDCA5Q96FF9 252 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 TUBGCP5Q96RT8 1024 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 A0A087WXM4 84 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 STX7O15400 261 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 ATP5F1P24539 256 aaPredicted RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 IDH3AP50213 366 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 ENPEPQ07075 957 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 VGLL4Q14135 290 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 PIWIL4Q7Z3Z4 852 aaKnown RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 IGDCC3Q8IVU1 814 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 GALNT15Q8N3T1 639 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 B3GALNT2Q8NCR0 500 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 RNF145Q96MT1 663 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 KCTD15Q96SI1 283 aaPredicted RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 PRKD2Q9BZL6 878 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 CHRAC1Q9NRG0 131 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 DSEQ9UL01 958 aa13.48□□□□□ -0.25
DDX54-201ENST00000306014 N4BP2Q86UW6 1770 aaPredicted RBP13.48□□□□□ -0.25
DDX54-201ENST00000306014 CXCL11O14625 94 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 TADA2AO75478 443 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 SNRPB2P08579 225 aaKnown RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 INSCQ1MX18 579 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 MGAT5BQ3V5L5 792 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 ARL13AQ5H913 290 aaPredicted RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 MICU2Q8IYU8 434 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 TMCO5AQ8N6Q1 288 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 SLC7A6OSQ96CW6 309 aaPredicted RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 SYT11Q9BT88 431 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 KATNAL1Q9BW62 490 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 TOP3BO95985 862 aaKnown RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 MLNP12872 115 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 RAB10P61026 200 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 GNASQ5JWF2 1037 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 TMEM192Q8IY95 271 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 DHRSXQ8N5I4 330 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 CCDC185Q8N715 623 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 MRPS26Q9BYN8 205 aaKnown RBP13.47□□□□□ -0.25
DDX54-201ENST00000306014 TRIM54Q9BYV2 358 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 SPAG4Q9NPE6 437 aa13.47□□□□□ -0.25
DDX54-201ENST00000306014 GNEQ9Y223 722 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms