RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 C2orf78A6NCI8 922 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 DRGXA6NNA5 263 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 CXorf49A8MYA2 514 aaPredicted RBP14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 J3KR12 359 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 FAM155BO75949 473 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 CNPP09543 421 aaKnown RBP14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 ZNF235Q14590 738 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 SPANXN3Q5MJ09 141 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 CERCAMQ5T4B2 595 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 NADSYN1Q6IA69 706 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 PSRC1Q6PGN9 363 aaPredicted RBP14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 MRPS31Q92665 395 aaKnown RBP14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 OXNAD1Q96HP4 312 aaPredicted RBP14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 KLHL5Q96PQ7 755 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 GCNAQ96QF7 691 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 CASS4Q9NQ75 786 aa14.78□□□□□ -0.04
SHCBP1-201ENST00000303383 LTBP2Q14767 1821 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 MAGEB16A2A368 324 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 CTNNB1P35222 781 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 GKAP1Q5VSY0 366 aaPredicted RBP14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 CCDC149Q6ZUS6 474 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 C7orf61Q8IZ16 206 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 ZNF683Q8IZ20 524 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 TTC17Q96AE7 1141 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 EMILIN2Q9BXX0 1053 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 MAFFQ9ULX9 164 aa14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 ZFP37Q9Y6Q3 630 aaPredicted RBP14.77□□□□□ -0.04
SHCBP1-201ENST00000303383 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 TSPAN3O60637 253 aa14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 HNRNPH2P55795 449 aaKnown RBP14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 SMAD3P84022 425 aaKnown RBP14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 ZNF177Q13360 481 aaPredicted RBP14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 AFMIDQ63HM1 303 aa14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 MICALCLQ6ZW33 695 aa14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 HERC6Q8IVU3 1022 aa14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 ZBP1Q9H171 429 aa14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 MTIF3Q9H2K0 278 aaKnown RBP14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 NOL6Q9H6R4 1146 aaKnown RBP14.77□□□□□ -0.05
SHCBP1-201ENST00000303383 STC2O76061 302 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 HDCP19113 662 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 GABRR2P28476 465 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 MAXP61244 160 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 MGAT5Q09328 741 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 MROH9Q5TGP6 573 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 KCTD11Q693B1 232 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 ZNF180Q9UJW8 692 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 CCDC78A2IDD5 438 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 FAM159BA6NKW6 160 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 TGM5O43548 720 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 ZWINTO95229 277 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 RPA3P35244 121 aaPredicted RBP14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 BMPR2Q13873 1038 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 MPP2Q14168 576 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 C16orf59Q7L2K0 433 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 ARNTL2Q8WYA1 636 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 MTBPQ96DY7 904 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 RAD9AQ99638 391 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 TCF25Q9BQ70 676 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 RNF38Q9H0F5 515 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 CXXC1Q9P0U4 656 aaPredicted RBP14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 ASB3Q9Y575 518 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 TCP11X1B4DZS4 312 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 COPEO14579 308 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 CKMP06732 381 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 CDH4P55283 916 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 RPS24P62847 133 aaKnown RBP14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 PDE1BQ01064 536 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 STEAP4Q687X5 459 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 FOXR1Q6PIV2 292 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 UNC5BQ8IZJ1 945 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 CERS2Q96G23 380 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 GORASP1Q9BQQ3 440 aa14.76□□□□□ -0.05
SHCBP1-201ENST00000303383 RHOCP08134 193 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 PYGBP11216 843 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SLC6A4P31645 630 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 IL10RBQ08334 325 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SLC10A7Q0GE19 358 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SF3A3Q12874 501 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SEPT6Q14141 434 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 ZKSCAN8Q15776 578 aaPredicted RBP14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 ADGRF1Q5T601 910 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 GPR65Q8IYL9 337 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 LRRC34Q8IZ02 419 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 CACNA2D3Q8IZS8 1091 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 ARL14EPQ8N8R7 260 aaPredicted RBP14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 PPHLN1Q8NEY8 458 aaKnown RBP14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SLC25A51Q9H1U9 297 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 ATXN3LQ9H3M9 355 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SMYD2Q9NRG4 433 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 MOCS1Q9NZB8 636 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 LSM7Q9UK45 103 aaKnown RBP14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SCAMP3O14828 347 aaKnown RBP14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 UGT1A9O60656 530 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 CLDN11O75508 207 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 C8AP07357 584 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 ERVK-10P10266 1014 aa14.75□□□□□ -0.05
SHCBP1-201ENST00000303383 SYN1P17600 705 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms