RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 STRADAQ7RTN6 431 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 MAVSQ7Z434 540 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 SAPCD2Q86UD0 394 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 CENPIQ92674 756 aaPredicted RBP13.7□□□□□ -0.22
CTDP1-202ENST00000299543 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 MARK4Q96L34 752 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 PLA2G4CQ9UP65 541 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 CLEC11AQ9Y240 323 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 LTBP3Q9NS15 1303 aa13.7□□□□□ -0.22
CTDP1-202ENST00000299543 YJEFN3A6XGL0 299 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 PDHXO00330 501 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 CD1EP15812 388 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 NFKBIAP25963 317 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 STT3AP46977 705 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 LILRA4P59901 499 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 PPIL2Q13356 520 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 SLC9B1Q4ZJI4 515 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 CPNE9Q8IYJ1 553 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 HSFY1Q96LI6 401 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 ZNF560Q96MR9 790 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 APBA2Q99767 749 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 RBMX2Q9Y388 322 aaKnown RBP13.69□□□□□ -0.22
CTDP1-202ENST00000299543 TNS1Q9HBL0 1735 aaKnown RBP13.69□□□□□ -0.22
CTDP1-202ENST00000299543 CD4P01730 458 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 LTFP02788 710 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 PTPN1P18031 435 aaKnown RBP13.69□□□□□ -0.22
CTDP1-202ENST00000299543 GJA5P36382 358 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 TRIP10Q15642 601 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 NADK2Q4G0N4 442 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 ZNF410Q86VK4 478 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 CCNYL1Q8N7R7 359 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 APBB2Q92870 758 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 ATXN3LQ9H3M9 355 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 LRRC40Q9H9A6 602 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 SIP14410 1827 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 XPOTO43592 962 aaKnown RBP13.69□□□□□ -0.22
CTDP1-202ENST00000299543 STAU1O95793 577 aaKnown RBP13.69□□□□□ -0.22
CTDP1-202ENST00000299543 AMHP03971 560 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 CHRNGP07510 517 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 NPR3P17342 541 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 NOS2P35228 1153 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 GSTM4Q03013 218 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 SNAPC2Q13487 334 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 NAPRTQ6XQN6 538 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 TIFABQ6ZNK6 161 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 CRYBG2Q8N1P7 616 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 WNT8BQ93098 351 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 CATSPER2Q96P56 530 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 SORT1Q99523 831 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 RHOBTB2Q9BYZ6 727 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 TLK1Q9UKI8 766 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 TSC22D4Q9Y3Q8 395 aa13.69□□□□□ -0.22
CTDP1-202ENST00000299543 MEIS3P2A8K0S8 358 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 DFFAO00273 331 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 IL1BP01584 269 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 C2P06681 752 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 SMIM10L2AP0DMW4 78 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 SMIM10L2BP0DMW5 78 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 NFKB1P19838 968 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 EPHA3P29320 983 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TBL3Q12788 808 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ZBTB6Q15916 424 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 C6orf183Q5T699 404 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TSNARE1Q96NA8 513 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 DUSP16Q9BY84 665 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ADAMTS10Q9H324 1103 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ANLNQ9NQW6 1124 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TK2O00142 265 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TREHO43280 583 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 DARSP14868 501 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TCN1P20061 433 aaPredicted RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 GRK2P25098 689 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 PTPN3P26045 913 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ADRA1BP35368 520 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 USP10Q14694 798 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 GSTA3Q16772 222 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ZNF792Q3KQV3 632 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TMCO4Q5TGY1 634 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 PSTKQ8IV42 348 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TDRD5Q8NAT2 981 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 SMYD1Q8NB12 490 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ARRDC4Q8NCT1 418 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 MAPK15Q8TD08 544 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 ACMSDQ8TDX5 336 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 CMTM5Q96DZ9 223 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 GCNAQ96QF7 691 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 OR52B2Q96RD2 323 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 C11orf84Q9BUA3 381 aaPredicted RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 NUF2Q9BZD4 464 aa13.68□□□□□ -0.22
CTDP1-202ENST00000299543 DDX43Q9NXZ2 648 aaKnown RBP13.68□□□□□ -0.22
CTDP1-202ENST00000299543 TBC1D30Q9Y2I9 924 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms