RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 TMEM233B4DJY2 109 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 PPP1R12AO14974 1030 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 DUSP11O75319 330 aaKnown RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 TCN1P20061 433 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 VHLP40337 213 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 RNF220Q5VTB9 566 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 STRADAQ7RTN6 431 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 RTN4RL1Q86UN2 441 aaPredicted RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 PHTF2Q8N3S3 785 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 PIWIL2Q8TC59 973 aaKnown RBP13.78□□□□□ -0.2
TTC39B-201ENST00000297615 TASP1Q9H6P5 420 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 KCNK4Q9NYG8 393 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 LNPEPQ9UIQ6 1025 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 FBXW11Q9UKB1 542 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 PPM1HQ9ULR3 514 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 PLA2G4CQ9UP65 541 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 AK5Q9Y6K8 562 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
TTC39B-201ENST00000297615 AIM2O14862 343 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 BNIP3LO60238 219 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 POLBP06746 335 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 PRSS56P0CW18 603 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 RALBP11234 206 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 WARSP23381 471 aaKnown RBP13.77□□□□□ -0.2
TTC39B-201ENST00000297615 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.2
TTC39B-201ENST00000297615 SEMG2Q02383 582 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 USP10Q14694 798 aaKnown RBP13.77□□□□□ -0.2
TTC39B-201ENST00000297615 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 RAP1GAP2Q684P5 730 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 IZUMO2Q6UXV1 221 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 KBTBD2Q8IY47 623 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 KCTD4Q8WVF5 259 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 CERS2Q96G23 380 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 SMARCD1Q96GM5 515 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 PANX3Q96QZ0 392 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 FERMT1Q9BQL6 677 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.2
TTC39B-201ENST00000297615 SNX15Q9NRS6 342 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 TAGLN3Q9UI15 199 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 CRYL1Q9Y2S2 319 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 GON4LQ3T8J9 2241 aa13.77□□□□□ -0.2
TTC39B-201ENST00000297615 A0A096LPK6 155 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 A8MX80 341 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 C9JVG2 144 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 MAP3K7O43318 606 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 DAB1O75553 588 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 CRHR1P34998 444 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 SLC34A1Q06495 639 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 TEX44Q53QW1 395 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 TMEM198Q66K66 360 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 TAF2Q6P1X5 1199 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
TTC39B-201ENST00000297615 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
TTC39B-201ENST00000297615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.77□□□□□ -0.21
TTC39B-201ENST00000297615 TOP6BLQ8N6T0 577 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 GTF3C2Q8WUA4 911 aaPredicted RBP13.77□□□□□ -0.21
TTC39B-201ENST00000297615 SLC45A3Q96JT2 553 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 EPAS1Q99814 870 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 FSD1LQ9BXM9 530 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 NACA2Q9H009 215 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 THAP1Q9NVV9 213 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 SIRPGQ9P1W8 387 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 ZFXP17010 805 aaPredicted RBP13.77□□□□□ -0.21
TTC39B-201ENST00000297615 DNAJB2P25686 324 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 NME5P56597 212 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 GRM3Q14832 879 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 PDCD2Q16342 344 aaPredicted RBP13.77□□□□□ -0.21
TTC39B-201ENST00000297615 ALFQ53S48 1182 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 NAPRTQ6XQN6 538 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 TRIM42Q8IWZ5 723 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 ZNF781Q8N8C0 355 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 ZNF398Q8TD17 642 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 MYEOVQ96EZ4 313 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 SENP6Q9GZR1 1112 aaPredicted RBP13.77□□□□□ -0.21
TTC39B-201ENST00000297615 GMIPQ9P107 970 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 TLL2Q9Y6L7 1015 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 PLXNB2O15031 1838 aa13.77□□□□□ -0.21
TTC39B-201ENST00000297615 DCLK1O15075 740 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 GPR182O15218 404 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 PLIN3O60664 434 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 BMP1P13497 986 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 ATP6V1C1P21283 382 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 LHX1P48742 406 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 KLC1Q07866 573 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 SEMA5AQ13591 1074 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 PCLAFQ15004 111 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 TEDDM1Q5T9Z0 273 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 LPCAT4Q643R3 524 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 KCNMB4Q86W47 210 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 TMPRSS6Q8IU80 811 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 DEFB107AQ8IZN7 70 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 ATPAF2Q8N5M1 289 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 SH3RF2Q8TEC5 729 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 SH3TC2Q8TF17 1288 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 KCNN1Q92952 543 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 GABRDO14764 452 aa13.76□□□□□ -0.21
TTC39B-201ENST00000297615 SMIM24O75264 130 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms