RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 SMG9Q9H0W8 520 aaKnown RBP24.58■■□□□ 1.53
SHISA5-201ENST00000296444 GBA3Q9H227 469 aa24.58■■□□□ 1.53
SHISA5-201ENST00000296444 TMEM248Q9NWD8 314 aa24.58■■□□□ 1.53
SHISA5-201ENST00000296444 AGO1Q9UL18 857 aaKnown RBP24.58■■□□□ 1.53
SHISA5-201ENST00000296444 MYO9BQ13459 2157 aa24.58■■□□□ 1.53
SHISA5-201ENST00000296444 CCDC189A1A4V9 331 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 RHOQP17081 205 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 CCNCP24863 283 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 ZNF135P52742 658 aaPredicted RBP24.58■■□□□ 1.52
SHISA5-201ENST00000296444 RING1Q06587 406 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 CASC4Q6P4E1 433 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 UMODL1-AS1Q8N2C9 162 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 ZNF778Q96MU6 729 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 TSGA13Q96PP4 275 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 RBM22Q9NW64 420 aaKnown RBP eCLIP24.58■■□□□ 1.52
SHISA5-201ENST00000296444 LGALS13Q9UHV8 139 aa24.58■■□□□ 1.52
SHISA5-201ENST00000296444 MATN3O15232 486 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 ACSL4O60488 711 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 DRD4P21917 467 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 CTNNB1P35222 781 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 SF3A3Q12874 501 aaKnown RBP eCLIP24.57■■□□□ 1.52
SHISA5-201ENST00000296444 CPLX4Q7Z7G2 160 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 KLF16Q9BXK1 252 aaPredicted RBP24.57■■□□□ 1.52
SHISA5-201ENST00000296444 RAD54BQ9Y620 910 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 WASH4PA8MWX3 477 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 GOLGA8RI6L899 631 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 OR1E1P30953 314 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 PPM1AP35813 382 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 ETFBP38117 255 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 CCR2P41597 374 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 CLNS1AP54105 237 aaKnown RBP24.57■■□□□ 1.52
SHISA5-201ENST00000296444 LRRC8BQ6P9F7 803 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 ZNF354CQ86Y25 554 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 POF1BQ8WVV4 589 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 PABPC5Q96DU9 382 aaKnown RBP24.57■■□□□ 1.52
SHISA5-201ENST00000296444 FCRL3Q96P31 734 aaPredicted RBP24.57■■□□□ 1.52
SHISA5-201ENST00000296444 IL12RB2Q99665 862 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 FNIP2Q9P278 1114 aa24.57■■□□□ 1.52
SHISA5-201ENST00000296444 H3BNC9 293 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 SMAPO00193 183 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 GEMIN4P57678 1058 aaKnown RBP24.56■■□□□ 1.52
SHISA5-201ENST00000296444 SPRED3Q2MJR0 410 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 LRRC3Q9BY71 257 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 BRD8Q9H0E9 1235 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 PPARGC1AQ9UBK2 798 aaKnown RBP24.56■■□□□ 1.52
SHISA5-201ENST00000296444 LINC01553A4QN01 128 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 CCL16O15467 120 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 AP2A1O95782 977 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 GABRR2P28476 465 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 BMPR1AP36894 532 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 EPHB3P54753 998 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 RIPK1Q13546 671 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 PGBD5Q8N414 524 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 MAB21L3Q8N8X9 362 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 ANKRD42Q8N9B4 389 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 OR7D4Q8NG98 312 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 SPPL3Q8TCT6 385 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 CCDC77Q9BR77 488 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 DHRS4Q9BTZ2 278 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 PHACTR1Q9C0D0 580 aa24.56■■□□□ 1.52
SHISA5-201ENST00000296444 TMEM120BA0PK00 339 aa24.55■■□□□ 1.52
SHISA5-201ENST00000296444 GREM1O60565 184 aa24.55■■□□□ 1.52
SHISA5-201ENST00000296444 C4orf22Q6V702 233 aa24.55■■□□□ 1.52
SHISA5-201ENST00000296444 MZB1Q8WU39 189 aa24.55■■□□□ 1.52
SHISA5-201ENST00000296444 CHMP6Q96FZ7 201 aa24.55■■□□□ 1.52
SHISA5-201ENST00000296444 TRMT2BQ96GJ1 504 aaKnown RBP24.55■■□□□ 1.52
SHISA5-201ENST00000296444 CERS4Q9HA82 394 aa24.55■■□□□ 1.52
SHISA5-201ENST00000296444 KCNK9Q9NPC2 374 aa24.55■■□□□ 1.52
SHISA5-201ENST00000296444 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.55■■□□□ 1.52
SHISA5-201ENST00000296444 HBS1LQ9Y450 684 aaKnown RBP24.55■■□□□ 1.52
SHISA5-201ENST00000296444 C2orf71A6NGG8 1288 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 PER2O15055 1255 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 MUSKO15146 869 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 GRM6O15303 877 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 C8AP07357 584 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 CALRP27797 417 aaKnown RBP24.54■■□□□ 1.52
SHISA5-201ENST00000296444 CHRNA4P43681 627 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 IFNAR2P48551 515 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 POTEHQ6S545 545 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 PPP1R21Q6ZMI0 780 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 TRABD2AQ86V40 505 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 PPM1NQ8N819 430 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 ANKS4BQ8N8V4 417 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 HERVK_113Q902F9 699 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 RSRC1Q96IZ7 334 aaKnown RBP24.54■■□□□ 1.52
SHISA5-201ENST00000296444 ENTPD7Q9NQZ7 604 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 BATF3Q9NR55 127 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 A0A1W2PRU2 124 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 CCT8L1PA6NM43 557 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 ATP9BO43861 1147 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 PMPCBO75439 489 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 ATP6V1G2O95670 118 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 BRAFP15056 766 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 ELF3P78545 371 aaPredicted RBP24.54■■□□□ 1.52
SHISA5-201ENST00000296444 VEPH1Q14D04 833 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 NUGGCQ68CJ6 796 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 CEP128Q6ZU80 1094 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 TMC8Q8IU68 726 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 CTAGE3PQ8IX95 158 aa24.54■■□□□ 1.52
SHISA5-201ENST00000296444 CCDC197Q8NCU1 140 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms