RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PPP1R2P1Q96PQ5 205 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 MRPL17Q9NRX2 175 aaKnown RBP9.33□□□□□ -0.92
PDPN-201ENST00000294489 GRID1Q9ULK0 1009 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 AAR2Q9Y312 384 aaKnown RBP9.33□□□□□ -0.92
PDPN-201ENST00000294489 INSL6Q9Y581 213 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 PCDHB12Q9Y5F1 795 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 IRAK3Q9Y616 596 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 RPS6KL1Q9Y6S9 549 aa9.33□□□□□ -0.92
PDPN-201ENST00000294489 MAGEB16A2A368 324 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 PEX11BO96011 259 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 EN2P19622 333 aaPredicted RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 NPY2RP49146 381 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 NEK3P51956 506 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 LACTB2Q53H82 288 aaPredicted RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 MROH9Q5TGP6 573 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 ZNF449Q6P9G9 518 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 PSRC1Q6PGN9 363 aaPredicted RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 SH2D5Q6ZV89 423 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 OTOP2Q7RTS6 562 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 LINC00523Q86TU6 105 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 MICALL1Q8N3F8 863 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 FIBCD1Q8N539 461 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 ZNF75CPQ92670 426 aaPredicted RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 BADQ92934 168 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 PSMG2Q969U7 264 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 PLD4Q96BZ4 506 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 ZYG11BQ9C0D3 744 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 SLC39A8Q9C0K1 460 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 RASSF4Q9H2L5 321 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 CASS4Q9NQ75 786 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 ZFATQ9P243 1243 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 SLC17A7Q9P2U7 560 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 STOML2Q9UJZ1 356 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 ATG2AQ2TAZ0 1938 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 GBF1Q92538 1859 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 H0YHG0 523 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 MATN3O15232 486 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 TEX28O15482 410 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 UGT1A9O60656 530 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 USP12O75317 370 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 OLFM2O95897 454 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 DNAJB2P25686 324 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 ATP5C1P36542 298 aaKnown RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 MGAT5Q09328 741 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 BMPR2Q13873 1038 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 FAM117BQ6P1L5 589 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 GBP7Q8N8V2 638 aaPredicted RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 CCDC63Q8NA47 563 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 FAM111AQ96PZ2 611 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 SRPK1Q96SB4 655 aaKnown RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 KLF16Q9BXK1 252 aaPredicted RBP9.32□□□□□ -0.92
PDPN-201ENST00000294489 UGT1A7Q9HAW7 530 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 UGT1A10Q9HAW8 530 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 UGT1A8Q9HAW9 530 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 NDFIP2Q9NV92 336 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 INSL5Q9Y5Q6 135 aa9.32□□□□□ -0.92
PDPN-201ENST00000294489 SLC12A8A0AV02 714 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 WDR91A4D1P6 747 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 C2CD2LO14523 706 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 COCHO43405 550 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 EDF1O60869 148 aaKnown RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 ANXA9O76027 345 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 FSBPO95073 299 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 F11P03951 625 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ALDH1A3P47895 512 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 NIPAL4Q0D2K0 466 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CDH17Q12864 832 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 PLD1Q13393 1074 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 FRG1Q14331 258 aaKnown RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 ANO4Q32M45 955 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 HECTD3Q5T447 861 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 FYB2Q5VWT5 728 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 FBXL22Q6P050 247 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 USP33Q8TEY7 942 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CERS2Q96G23 380 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MLPHQ9BV36 600 aaPredicted RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 LRRC3Q9BY71 257 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MCOLN1Q9GZU1 580 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 IL22Q9GZX6 179 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MANSC1Q9H8J5 431 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CYP4F11Q9HBI6 524 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MKS1Q9NXB0 559 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 UXTQ9UBK9 157 aaPredicted RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 ASB3Q9Y575 518 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 RFPL1O75677 317 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 LATS1O95835 1130 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MAPKAPK2P49137 400 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ACTN3Q08043 901 aaPredicted RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 FAM133BQ5BKY9 247 aaKnown RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 TIFABQ6ZNK6 161 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 RASSF3Q86WH2 238 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CHSY1Q86X52 802 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 MIB1Q86YT6 1006 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 HERC6Q8IVU3 1022 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 CNTD1Q8N815 330 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.31□□□□□ -0.92
PDPN-201ENST00000294489 IGSF8Q969P0 613 aa9.31□□□□□ -0.92
PDPN-201ENST00000294489 ZNF419Q96HQ0 510 aaPredicted RBP9.31□□□□□ -0.92
PDPN-201ENST00000294489 FCRL5Q96RD9 977 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms