RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ZBTB42B2RXF5 422 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 MATN2O00339 956 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 TIMM44O43615 452 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 HBP1O60381 514 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 PLOD1Q02809 727 aaPredicted RBP14.96□□□□□ -0.01
CCNF-201ENST00000293968 SEPT6Q14141 434 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 PABPC1LQ4VXU2 614 aaKnown RBP14.96□□□□□ -0.01
CCNF-201ENST00000293968 AGKQ53H12 422 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 MTX3Q5HYI7 312 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 PGAM4Q8N0Y7 254 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 RNF34Q969K3 372 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 PDGFCQ9NRA1 345 aa14.96□□□□□ -0.01
CCNF-201ENST00000293968 TDRKHQ9Y2W6 561 aaKnown RBP14.96□□□□□ -0.01
CCNF-201ENST00000293968 GABBR2O75899 941 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 LMO2P25791 158 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 ETFBP38117 255 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 PSME3P61289 254 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 BST2Q10589 180 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 CTBP1Q13363 440 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 NAB1Q13506 487 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 PRPSAP1Q14558 356 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 DLK2Q6UY11 383 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 AHI1Q8N157 1196 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 SIX6OS1Q8N1H7 587 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 HSPBAP1Q96EW2 488 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 CELF6Q96J87 481 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 OXSMQ9NWU1 459 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 HACD1B0YJ81 288 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 SUPT3HO75486 399 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 RPL10P27635 214 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 GNL1P36915 607 aaPredicted RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 TPI1P60174 286 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 PITRM1Q5JRX3 1037 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 LIPMQ5VYY2 423 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 RPS27LQ71UM5 84 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 SETD3Q86TU7 594 aaPredicted RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 ZNF786Q8N393 782 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 GRIN3AQ8TCU5 1115 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 EXT2Q93063 718 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 ZNF512Q96ME7 567 aaPredicted RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 NOL11Q9H8H0 719 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 CHST12Q9NRB3 414 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 RIMS3Q9UJD0 308 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 COPG1Q9Y678 874 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 ZBTB24O43167 697 aaPredicted RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 JCHAINP01591 159 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 GLDCP23378 1020 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 NMBRP28336 390 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 HSPA13P48723 471 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 POU6F1Q14863 301 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 PIGGQ5H8A4 983 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 CELF3Q5SZQ8 465 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 PSTKQ8IV42 348 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 DDHD2O94830 711 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 ZNF286BP0CG31 522 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 ALOX15P16050 662 aaPredicted RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 DPP6P42658 865 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 INCA1Q0VD86 236 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 ELMO2Q96JJ3 720 aa14.95□□□□□ -0.02
CCNF-201ENST00000293968 RSL24D1Q9UHA3 163 aaKnown RBP14.95□□□□□ -0.02
CCNF-201ENST00000293968 NEMP2A6NFY4 417 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 CDK4P11802 303 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 TSPAN8P19075 237 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 NFKB1P19838 968 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 SLC5A2P31639 672 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 BCAT1P54687 386 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ITGA7Q13683 1181 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 KIZQ2M2Z5 673 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 PDZD4Q76G19 769 aaPredicted RBP14.94□□□□□ -0.02
CCNF-201ENST00000293968 TRIM74Q86UV6 250 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 TRIM73Q86UV7 250 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 KBTBD7Q8WVZ9 684 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ZNF839A8K0R7 811 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 CLDN5O00501 218 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 PENKP01210 267 aaPredicted RBP14.94□□□□□ -0.02
CCNF-201ENST00000293968 TGFB3P10600 412 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 CKMT2P17540 419 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 AKAP5P24588 427 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 PTPN9P43378 593 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 C16orf72Q14CZ0 275 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ANO4Q32M45 955 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ZBTB49Q6ZSB9 765 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 CLVS1Q8IUQ0 354 aaPredicted RBP14.94□□□□□ -0.02
CCNF-201ENST00000293968 TTC39CQ8N584 583 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 CXorf38Q8TB03 319 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ADAM28Q9UKQ2 775 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ATP6AP2A0A1C7CYW4 349 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ATP6AP2O75787 350 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 KCTD2Q14681 263 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ITPRIPL1Q6GPH6 555 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 SLC26A9Q7LBE3 791 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ZNF410Q86VK4 478 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 FSTL5Q8N475 847 aaPredicted RBP14.94□□□□□ -0.02
CCNF-201ENST00000293968 RMND5BQ96G75 393 aaPredicted RBP14.94□□□□□ -0.02
CCNF-201ENST00000293968 SPATC1LQ9H0A9 340 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 ACOT9Q9Y305 439 aa14.94□□□□□ -0.02
CCNF-201ENST00000293968 A0A0J9YVX5 310 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 TIPRLO75663 272 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 NDUFV1P49821 464 aa14.93□□□□□ -0.02
CCNF-201ENST00000293968 ESRRGP62508 458 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms