RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TMPRSS4Q9NRS4 437 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 RAB6BQ9NRW1 208 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 DNMT3LQ9UJW3 386 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TRANK1O15050 2925 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 KLF11O14901 512 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TEX28O15482 410 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 GCATO75600 419 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 CXCL14O95715 111 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 C1RP00736 705 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 KRT16P08779 473 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 ADRA1DP25100 572 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 HOXC13P31276 330 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 CA8P35219 290 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 PGFP49763 221 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 MLLT6P55198 1093 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-201ENST00000292476 COG7P83436 770 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 ZNF33AQ06730 810 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 HECTD3Q5T447 861 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 IGDCC3Q8IVU1 814 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 MAFAQ8NHW3 353 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-201ENST00000292476 MTBPQ96DY7 904 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 FCRL2Q96LA5 508 aaPredicted RBP17.16■□□□□ 0.34
CPSF4-201ENST00000292476 TUBB6Q9BUF5 446 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 MAGEB5Q9BZ81 275 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 NACA2Q9H009 215 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 EBF2Q9HAK2 575 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 ANLNQ9NQW6 1124 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 ETNK2Q9NVF9 386 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
CPSF4-201ENST00000292476 PRRC2BQ5JSZ5 2229 aaKnown RBP17.15■□□□□ 0.34
CPSF4-201ENST00000292476 FAM72CH0Y354 149 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 MSI1O43347 362 aaKnown RBP17.15■□□□□ 0.34
CPSF4-201ENST00000292476 KRT37O76014 449 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 CSPG5O95196 566 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 RB1P06400 928 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 RBL1P28749 1068 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 ETV4P43268 484 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 MAGEA3P43357 314 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 GPM6BQ13491 265 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 CCDC85BQ15834 202 aaPredicted RBP17.15■□□□□ 0.34
CPSF4-201ENST00000292476 KBTBD12Q3ZCT8 623 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 FAM72AQ5TYM5 149 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 FAM72DQ6L9T8 149 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 FAM72BQ86X60 149 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 TRIM42Q8IWZ5 723 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 HTR3CQ8WXA8 447 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 PSMG2Q969U7 264 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 MRRFQ96E11 262 aaKnown RBP17.15■□□□□ 0.34
CPSF4-201ENST00000292476 SIK2Q9H0K1 926 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 RETREG1Q9H6L5 497 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 MANSC1Q9H8J5 431 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 ETNK1Q9HBU6 452 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 LNPEPQ9UIQ6 1025 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 NUDT5Q9UKK9 219 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 TTLL3Q9Y4R7 772 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 INSL5Q9Y5Q6 135 aa17.15■□□□□ 0.34
CPSF4-201ENST00000292476 SLC12A8A0AV02 714 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 ZNF840PA6NDX5 716 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 I6L893 689 aaPredicted RBP17.14■□□□□ 0.33
CPSF4-201ENST00000292476 C1QAP02745 245 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 HMGA1P17096 107 aaKnown RBP17.14■□□□□ 0.33
CPSF4-201ENST00000292476 CCNFP41002 786 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 TWF1Q12792 350 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 SLC10A2Q12908 348 aaPredicted RBP17.14■□□□□ 0.33
CPSF4-201ENST00000292476 RWDD4Q6NW29 188 aaKnown RBP17.14■□□□□ 0.33
CPSF4-201ENST00000292476 CYS1Q717R9 158 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 LRRC6Q86X45 466 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 LRRC49Q8IUZ0 686 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 TRIM55Q9BYV6 548 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 PPARGC1AQ9UBK2 798 aaKnown RBP17.14■□□□□ 0.33
CPSF4-201ENST00000292476 MTCH2Q9Y6C9 303 aa17.14■□□□□ 0.33
CPSF4-201ENST00000292476 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 H3BNC9 293 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 MFSD11O43934 449 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 IGLV3-27P01718 113 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 SNRPAP09012 282 aaKnown RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 CNPP09543 421 aaKnown RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 SRGAP2BP0DMP2 458 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 CDK16Q00536 496 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 NLRP9Q7RTR0 991 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 DNAJB7Q7Z6W7 309 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 MIB1Q86YT6 1006 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 ELMOD1Q8N336 334 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 CCNYQ8ND76 341 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 CFAP61Q8NHU2 1237 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 TCF25Q9BQ70 676 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 XAB2Q9HCS7 855 aaKnown RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 ENTPD7Q9NQZ7 604 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 NOP53Q9NZM5 478 aaKnown RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 ZC3H7BQ9UGR2 993 aaKnown RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 HS3ST4Q9Y661 456 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 WASH4PA8MWX3 477 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 C5orf67F2Z3F1 127 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 DNAJC6O75061 913 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 MOCS2O96007 188 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 LRG1P02750 347 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 CDK18Q07002 472 aa17.13■□□□□ 0.33
CPSF4-201ENST00000292476 PRKD1Q15139 912 aaPredicted RBP17.13■□□□□ 0.33
CPSF4-201ENST00000292476 MANEALQ5VSG8 457 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms