RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CCL26Q9Y258 94 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 HEY1Q9Y5J3 304 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CHD9Q3L8U1 2897 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SMAPO00193 183 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ECEL1O95672 775 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ADH1CP00326 375 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 LAMP2P13473 410 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 FOSL2P15408 326 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 PECAM1P16284 738 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 GJA1P17302 382 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 GARSP41250 739 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 FBXW4P57775 412 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 BASP1P80723 227 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 RAD51Q06609 339 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ADCY2Q08462 1091 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CBX2Q14781 532 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 FYB2Q5VWT5 728 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CCDC137Q6PK04 289 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ARHGAP12Q8IWW6 846 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 BBS7Q8IWZ6 715 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MYRIPQ8NFW9 859 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 TFB1MQ8WVM0 346 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 AP1M1Q9BXS5 423 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SGK1O00141 431 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MAP3K7O43318 606 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CASP2P42575 452 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 EIF3EP60228 445 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 DR1Q01658 176 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 RFTN1Q14699 578 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 EML3Q32P44 896 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 POTEHQ6S545 545 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 KIAA0907Q7Z7F0 614 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SUGP1Q8IWZ8 645 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ANKRD42Q8N9B4 389 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 TDRD5Q8NAT2 981 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ACTL9Q8TC94 416 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CASKIN2Q8WXE0 1202 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ING5Q8WYH8 240 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MSANTD3Q96H12 275 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 LMLNQ96KR4 655 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 RAB17Q9H0T7 212 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ZFP14Q9HCL3 533 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MBTPS2O43462 519 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 HOXD9P28356 352 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ALDH3A1P30838 453 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 PREPLQ4J6C6 727 aaPredicted RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CCDC13Q8IYE1 715 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 CPA6Q8N4T0 437 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 FIBINQ8TAL6 211 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MAML1Q92585 1016 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 HLA-CQ95604 372 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MAGOHBQ96A72 148 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 RILPQ96NA2 401 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 MYADMQ96S97 322 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 POMKQ9H5K3 350 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 PCDH9Q9HC56 1237 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SPHK2Q9NRA0 654 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SMPD4Q9NXE4 827 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 R3HDM2Q9Y2K5 976 aaKnown RBP8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 SNX10Q9Y5X0 201 aa8.61□□□□□ -1.03
PTPDC1-201ENST00000288976 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 C5orf60A6NFR6 353 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ZSCAN5CA6NGD5 496 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 CCDC160A6NGH7 325 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 DYNC1I1O14576 645 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 CHADO15335 359 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 GCATO75600 419 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 EIF2DP41214 584 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 IFNAR2P48551 515 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 DLX2Q07687 328 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 IL10RBQ08334 325 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 CBLBQ13191 982 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ZNF177Q13360 481 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 E2F5Q15329 346 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 TTC27Q6P3X3 843 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ATPAF2Q8N5M1 289 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 NPWQ8N729 165 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 BBOF1Q8ND07 529 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 MYLIPQ8WY64 445 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 TMA16Q96EY4 203 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ETNK2Q9NVF9 386 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 DUS2Q9NX74 493 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 SMARCAL1Q9NZC9 954 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 FBXO10Q9UK96 956 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 TRHDEQ9UKU6 1024 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 UTP11Q9Y3A2 253 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 DRG2P55039 364 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 GAD2Q05329 585 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC10A2Q12908 348 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 HTR4Q13639 388 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 TCEA2Q15560 299 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 MTERF4Q7Z6M4 381 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 WFIKKN2Q8TEU8 576 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ARHGEF2Q92974 986 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 IRF7Q92985 503 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 TTC1Q99614 292 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ACE2Q9BYF1 805 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms