RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 MED8Q96G25 268 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 ATXN7L3BQ96GX2 97 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 RPRD1AQ96P16 312 aaPredicted RBP11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 TSG101Q99816 390 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 FEM1AQ9BSK4 669 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 GOLPH3LQ9H4A5 285 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 FAM204AQ9H8W3 233 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 POPDC2Q9HBU9 364 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 DNAJC28Q9NX36 388 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 COX16Q9P0S2 106 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 VPS28Q9UK41 221 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 COL6A6A6NMZ7 2263 aa11.02□□□□□ -0.65
NSMCE2-201ENST00000287437 DOCK9Q9BZ29 2069 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 NEMP2A6NFY4 417 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 E5RJQ4 531 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 K7ENP7 123 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 RNF103O00237 685 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 SRCP12931 536 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 RBMS1P29558 406 aaKnown RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 GGCXP38435 758 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 ACADSBP45954 432 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 FMO5P49326 533 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 DUSP3P51452 185 aaPredicted RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 OXCT1P55809 520 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 YWHAZP63104 245 aaKnown RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 FKBP3Q00688 224 aaKnown RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 EIF4EBP2Q13542 120 aaPredicted RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 TAF5Q15542 800 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 CDKN3Q16667 212 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 DENND1BQ6P3S1 775 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 GUSBP11Q6P575 273 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 INO80CQ6PI98 192 aaPredicted RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 FOXR1Q6PIV2 292 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 CRTC1Q6UUV9 634 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 Q6ZSR6 202 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 PRICKLE2Q7Z3G6 844 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 PTAR1Q7Z6K3 402 aaPredicted RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 ABI3BPQ7Z7G0 1075 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 ARHGEF19Q8IW93 802 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 SLC46A1Q96NT5 459 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 TRIM62Q9BVG3 475 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 SLC12A6Q9UHW9 1150 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 ZFR2Q9UPR6 939 aaKnown RBP11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 OR51B4Q9Y5P0 310 aa11.01□□□□□ -0.65
NSMCE2-201ENST00000287437 HECTD1Q9ULT8 2610 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11□□□□□ -0.65
NSMCE2-201ENST00000287437 CPED1A4D0V7 1026 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 A6NNZ2 444 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 K7ERQ8 282 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 LZTS3O60299 673 aaPredicted RBP11□□□□□ -0.65
NSMCE2-201ENST00000287437 ZNF202O95125 648 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 PCDH8O95206 1070 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 WISP1O95388 367 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 MT-CO1P00395 513 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 CHRNA3P32297 505 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 HNRNPKP61978 463 aaKnown RBP eCLIP11□□□□□ -0.652e-6■■■■□ 20.7
NSMCE2-201ENST00000287437 SKOR1P84550 965 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 ZNF177Q13360 481 aaPredicted RBP11□□□□□ -0.65
NSMCE2-201ENST00000287437 PNOCQ13519 176 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 AUHQ13825 339 aaKnown RBP11□□□□□ -0.65
NSMCE2-201ENST00000287437 FZD2Q14332 565 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 NEK5Q6P3R8 708 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 IGF2-ASQ6U949 168 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 EFL1Q7Z2Z2 1120 aaKnown RBP11□□□□□ -0.65
NSMCE2-201ENST00000287437 ZNF548Q8NEK5 533 aaPredicted RBP11□□□□□ -0.65
NSMCE2-201ENST00000287437 OR2A12Q8NGT7 310 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 LMO3Q8TAP4 145 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 RNF34Q969K3 372 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 SNX21Q969T3 373 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 IFT43Q96FT9 208 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 PPP1R9BQ96SB3 815 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 DUSP23Q9BVJ7 150 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 SLC4A5Q9BY07 1137 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 MFRPQ9BY79 579 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 MUC3BQ9H195 1237 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 USP29Q9HBJ7 922 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 METTL14Q9HCE5 456 aaKnown RBP11□□□□□ -0.65
NSMCE2-201ENST00000287437 DYRK4Q9NR20 520 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 EVA1BQ9NVM1 165 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 DDIT4Q9NX09 232 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 VANGL2Q9ULK5 521 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 ENTPD2Q9Y5L3 495 aa11□□□□□ -0.65
NSMCE2-201ENST00000287437 POM121BA6NF01 834 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 CASC3O15234 703 aaKnown RBP10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 SNAP91O60641 907 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 SLC2A3P11169 496 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 KRT5P13647 590 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 RRM1P23921 792 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 CCR1P32246 355 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 KRT85P78386 507 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 FGL2Q14314 439 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 DRAP1Q14919 205 aaPredicted RBP10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 DEFB133Q30KQ1 61 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 TMEM259Q4ZIN3 620 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 ZNF658Q5TYW1 1059 aaPredicted RBP10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 ZCCHC8Q6NZY4 707 aaKnown RBP10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 CCDC81Q6ZN84 652 aa10.99□□□□□ -0.65
NSMCE2-201ENST00000287437 ERN2Q76MJ5 926 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms