RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 OPLAHO14841 1288 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 GUCY1B2O75343 617 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 BMP6P22004 513 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 CCND1P24385 295 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ABL2P42684 1182 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 STAG3L4Q8TBR4 150 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 ATL1Q8WXF7 558 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 PIK3R5Q8WYR1 880 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 RSPH1Q8WYR4 309 aa18.8■□□□□ 0.6
PCDH1-201ENST00000287008 EPHB6O15197 1021 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 TTPAP49638 278 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF697Q5TEC3 545 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 PLD3Q8IV08 490 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 MICU2Q8IYU8 434 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 TMEM120AQ9BXJ8 343 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 THAP1Q9NVV9 213 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 SLIT3O75094 1523 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 ANKDD1BA6NHY2 528 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 VMP1Q96GC9 406 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 FAM84AQ96KN4 292 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 AGO1Q9UL18 857 aaKnown RBP18.79■□□□□ 0.6
PCDH1-201ENST00000287008 STARD13Q9Y3M8 1113 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 FAM126BQ8IXS8 530 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 TMCO5AQ8N6Q1 288 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 TEX9Q8N6V9 391 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 SPACA7Q96KW9 195 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 QRFPRQ96P65 431 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 MPP6Q9NZW5 540 aa18.79■□□□□ 0.6
PCDH1-201ENST00000287008 UBXN8O00124 270 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 SLC1A6P48664 564 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 MSLNQ13421 630 aaPredicted RBP18.78■□□□□ 0.6
PCDH1-201ENST00000287008 ZCCHC8Q6NZY4 707 aaKnown RBP18.78■□□□□ 0.6
PCDH1-201ENST00000287008 TNFRSF25Q93038 417 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 PSME2Q9UL46 239 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 PCDHB9Q9Y5E1 797 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 CES1P23141 567 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 POU1F1P28069 291 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 SULT2A1Q06520 285 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 NOL9Q5SY16 702 aaKnown RBP18.78■□□□□ 0.6
PCDH1-201ENST00000287008 STXBP5Q5T5C0 1151 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 FBXO22Q8NEZ5 403 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 OR8D1Q8WZ84 308 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 HGH1Q9BTY7 390 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 SEZ6LQ9BYH1 1024 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 CAAP1Q9H8G2 361 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 KIAA1522Q9P206 1035 aaPredicted RBP18.78■□□□□ 0.6
PCDH1-201ENST00000287008 KLC1Q07866 573 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 DAB2IPQ5VWQ8 1189 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 DBF4BQ8NFT6 615 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 COL20A1Q9P218 1284 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 CFAP97Q9P2B7 532 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 MAFBQ9Y5Q3 323 aaPredicted RBP18.78■□□□□ 0.6
PCDH1-201ENST00000287008 CALB2P22676 271 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 AIF1P55008 147 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 LCLAT1Q6UWP7 414 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 STRADAQ7RTN6 431 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 SRLQ86TD4 932 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 BAP1Q92560 729 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 VPS33AQ96AX1 596 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 ZMYM5Q9UJ78 669 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 HAO1Q9UJM8 370 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF214Q9UL59 606 aaPredicted RBP18.78■□□□□ 0.6
PCDH1-201ENST00000287008 RWDD3Q9Y3V2 267 aa18.78■□□□□ 0.6
PCDH1-201ENST00000287008 CLDN11O75508 207 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 ABCB1P08183 1280 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 CDK18Q07002 472 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 SLC25A52Q3SY17 297 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 FUT10Q6P4F1 479 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 MTDHQ86UE4 582 aaKnown RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 NPAS4Q8IUM7 802 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 ZNF655Q8N720 491 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 DNAJC9Q8WXX5 260 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 UBE2E3Q969T4 207 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 OXCT2Q9BYC2 517 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 WNT7AO00755 349 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 RPL22P35268 128 aaKnown RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 PTPRNQ16849 979 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 PLEKHM3Q6ZWE6 761 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 CREG2Q8IUH2 290 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 C4orf32Q8N8J7 132 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 CLEC4DQ8WXI8 215 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 BTN2A3PQ96KV6 586 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 YIPF3Q9GZM5 350 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 LHX5Q9H2C1 402 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 GNPTGQ9UJJ9 305 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 USP1O94782 785 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 OR4Q2P0C623 313 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 CXCR2P25025 360 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 ARL2P36404 184 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 MAXP61244 160 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 PKN2Q16513 984 aaKnown RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 KYAT3Q6YP21 454 aaKnown RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 UNC5AQ6ZN44 842 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 LENG1Q96BZ8 264 aaPredicted RBP18.77■□□□□ 0.6
PCDH1-201ENST00000287008 RBPJLQ9UBG7 517 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 TAGLN3Q9UI15 199 aa18.77■□□□□ 0.6
PCDH1-201ENST00000287008 TSPAN1O60635 241 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 DNTTP04053 509 aa18.77■□□□□ 0.59
PCDH1-201ENST00000287008 ADRA1DP25100 572 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms