RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TRNP1Q6NT89 227 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 LCLAT1Q6UWP7 414 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 ZNF778Q96MU6 729 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 MRPL46Q9H2W6 279 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 STN1Q9H668 368 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 SF3B1O75533 1304 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■■■■ 57.5
SCAF4-201ENST00000286835 TRMUO75648 421 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 ARF4P18085 180 aaPredicted RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 L1CAMP32004 1257 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PLIN5Q00G26 463 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 SLC9A4Q6AI14 798 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 ZFP1Q6P2D0 407 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 GPR141Q7Z602 305 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 TTC30AQ86WT1 665 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 LRTOMTQ8WZ04 291 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 MRPS26Q9BYN8 205 aaKnown RBP13.62□□□□□ -0.23
SCAF4-201ENST00000286835 MORF4L1Q9UBU8 362 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 PCDHB12Q9Y5F1 795 aa13.62□□□□□ -0.23
SCAF4-201ENST00000286835 ADGRA2Q96PE1 1338 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 DNAJA2O60884 412 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 GCATO75600 419 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 TIPRLO75663 272 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ASLP04424 464 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 TPP2P29144 1249 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ATICP31939 592 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 CPOXP36551 454 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 GRIA3P42263 894 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 NR1H2P55055 460 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 INHBEP58166 350 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 PSME3P61289 254 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 PPIL2Q13356 520 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 FAM83EQ2M2I3 478 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ARL13BQ3SXY8 428 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 FUT11Q495W5 492 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ZNF567Q8N184 647 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 TMEM174Q8WUU8 243 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 NIFKQ9BYG3 293 aaKnown RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 FAM149AA5PLN7 773 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ZBBXA8MT70 800 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 CLDN5O00501 218 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 BUD23O43709 281 aaKnown RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 SRP72O76094 671 aaKnown RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 STMN1P16949 149 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 IL1RL1Q01638 556 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 FASTKQ14296 549 aaKnown RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 SPANXN3Q5MJ09 141 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 TP53INP2Q8IXH6 220 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 FAM47BQ8NA70 645 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 C18orf25Q96B23 403 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 SETD4Q9NVD3 440 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 KIAA1257Q9ULG3 409 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 TMCO1Q9UM00 188 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 MYRFQ9Y2G1 1151 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 PPME1Q9Y570 386 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 CKMT2P17540 419 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 GRIA2P42262 883 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 HSPA13P48723 471 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 STX5Q13190 355 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 GRM3Q14832 879 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 SOWAHAQ2M3V2 549 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 RPS27LQ71UM5 84 aaKnown RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 RP9Q8TA86 221 aaKnown RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 HSPBAP1Q96EW2 488 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 BTBD9Q96Q07 612 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 RRN3Q9NYV6 651 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 PTTG2Q9NZH5 202 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 EGFL7Q9UHF1 273 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 TNFSF13BQ9Y275 285 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 HEATR9A2RTY3 570 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 NEMP2A6NFY4 417 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 NR5A2O00482 541 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 PPEF2O14830 753 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 UBDO15205 165 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 NFKB1P19838 968 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 BCAT1P54687 386 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 BST2Q10589 180 aaKnown RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ATP1A4Q13733 1029 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 NEDD8Q15843 81 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 SLC10A6Q3KNW5 377 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 SLC44A4Q53GD3 710 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 IL23RQ5VWK5 629 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 NAPRTQ6XQN6 538 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 RIOX2Q8IUF8 465 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ZFP28Q8NHY6 868 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 PCYT2Q99447 389 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 ING2Q9H160 280 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 COQ10BQ9H8M1 238 aa13.61□□□□□ -0.23
SCAF4-201ENST00000286835 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 TIMM13Q9Y5L4 95 aaPredicted RBP13.61□□□□□ -0.23
SCAF4-201ENST00000286835 KIF13BQ9NQT8 1826 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 HMX2A2RU54 273 aa13.6□□□□□ -0.23
SCAF4-201ENST00000286835 FOXD2O60548 495 aaPredicted RBP13.6□□□□□ -0.23
SCAF4-201ENST00000286835 HDCP19113 662 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms