RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 PATL1Q86TB9 770 aaKnown RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 RSPH3Q86UC2 560 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 CCDC185Q8N715 623 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 SNX27Q96L92 541 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 SLC9A7Q96T83 725 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 MMP19Q99542 508 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 FDXACB1Q9BRP7 624 aaPredicted RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 SLC2A11Q9BYW1 496 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 CASS4Q9NQ75 786 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 SYBUQ9NX95 663 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 PSAT1Q9Y617 370 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 A0A0G2JLL6 359 aaPredicted RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 SLCO1B7G3V0H7 640 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 CBFA2T3O75081 653 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 TYK2P29597 1187 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 POLD2P49005 469 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 HCAR3P49019 387 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 MPP3Q13368 585 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 GK3PQ14409 553 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 SOWAHAQ2M3V2 549 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 C6orf52Q5T4I8 152 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 C16orf89Q6UX73 402 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 PRRT2Q7Z6L0 340 aaPredicted RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 ACOT1Q86TX2 421 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 TMEM130Q8N3G9 435 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 KIF12Q96FN5 646 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 P2RY11Q96G91 374 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 IL22Q9GZX6 179 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 MRM3Q9HC36 420 aaKnown RBP10.56□□□□□ -0.72
SKA1-201ENST00000285116 GDAP2Q9NXN4 497 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 NSMCE4AQ9NXX6 385 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 ZNF711Q9Y462 761 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
SKA1-201ENST00000285116 AP3B1O00203 1094 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 NCAM2O15394 837 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 TIMM44O43615 452 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 MFSD11O43934 449 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 AP2A1O95782 977 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 PGK2P07205 417 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 NUP107P57740 925 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 ARHGAP1Q07960 439 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 TTLL4Q14679 1199 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 KCTD11Q693B1 232 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 PAOXQ6QHF9 649 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 ALKAL1Q6UXT8 129 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 NCCRP1Q6ZVX7 275 aaPredicted RBP10.55□□□□□ -0.72
SKA1-201ENST00000285116 AMIGO2Q86SJ2 522 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 UNC5BQ8IZJ1 945 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 TRIML2Q8N7C3 387 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 TSPAN14Q8NG11 270 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 RP9Q8TA86 221 aaKnown RBP10.55□□□□□ -0.72
SKA1-201ENST00000285116 DLG3Q92796 817 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 CDCA5Q96FF9 252 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 RNPEPQ9H4A4 650 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 COG4Q9H9E3 785 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 MRGBPQ9NV56 204 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 VTI1BQ9UEU0 232 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 CNOT11Q9UKZ1 510 aaKnown RBP10.55□□□□□ -0.72
SKA1-201ENST00000285116 NR2E3Q9Y5X4 410 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 MYOCOSA0A1B0GUC4 107 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 KANSL1LA0AUZ9 987 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 RBM47A0AV96 593 aaKnown RBP10.55□□□□□ -0.72
SKA1-201ENST00000285116 H0YJX3 145 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 MATN2O00339 956 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 PIK3R2O00459 728 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 MTSS1O43312 755 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 ZBTB14O43829 449 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 TRIM13O60858 407 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 TRPA1O75762 1119 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 INSRRP14616 1297 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 GOT1P17174 413 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 ZNF135P52742 658 aaPredicted RBP10.55□□□□□ -0.72
SKA1-201ENST00000285116 SCAPQ12770 1279 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 SPIDRQ14159 915 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 OTUD1Q5VV17 481 aaPredicted RBP10.55□□□□□ -0.72
SKA1-201ENST00000285116 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 DCLK2Q8N568 766 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 CPB2Q96IY4 423 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 ZNF668Q96K58 619 aaPredicted RBP10.55□□□□□ -0.72
SKA1-201ENST00000285116 CCT7Q99832 543 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 OXSMQ9NWU1 459 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 RRN3Q9NYV6 651 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 HACD3Q9P035 362 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 TXNDC16Q9P2K2 825 aa10.55□□□□□ -0.72
SKA1-201ENST00000285116 ZCWPW2A0A1B0GU75 182 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 RGSL1A5PLK6 1076 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 GLTPD2A6NH11 291 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 XPO1O14980 1071 aaKnown RBP10.54□□□□□ -0.72
SKA1-201ENST00000285116 DCLK1O15075 740 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 DCXO43602 365 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 COL6A2P12110 1019 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 PSMC3P17980 439 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 ALDH3B2P48448 385 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 PSMD8P48556 350 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 NPY2RP49146 381 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 CDKL1Q00532 357 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 PEX6Q13608 980 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 FLOT2Q14254 428 aa10.54□□□□□ -0.72
SKA1-201ENST00000285116 LPCAT2Q7L5N7 544 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms