RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 LMAN2Q12907 356 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 GPS1Q13098 491 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 SLC12A1Q13621 1099 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 HNRNPDQ14103 355 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 LEXMQ3ZCV2 418 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 FAM153CQ494X1 144 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 TEX44Q53QW1 395 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 C4orf22Q6V702 233 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 MAML1Q92585 1016 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 CAVIN3Q969G5 261 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 LMLNQ96KR4 655 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 SPATA13Q96N96 652 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 TRMT61BQ9BVS5 477 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 ECT2Q9H8V3 914 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 PDFQ9HBH1 243 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 HPS4Q9NQG7 708 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 WHRNQ9P202 907 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 FAM153AQ9UHL3 310 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 VPS28Q9UK41 221 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 NYNRINQ9P2P1 1898 aaKnown RBP19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 CHD5Q8TDI0 1954 aa19.3■□□□□ 0.68
PDLIM3-202ENST00000284770 OPHN1O60890 802 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 JCHAINP01591 159 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 HLA-FP30511 346 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 CD70P32970 193 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 PLK1P53350 603 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 ZBTB17Q13105 803 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 FAM182AQ5T1J6 154 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 ZNF567Q8N184 647 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 FBXO25Q8TCJ0 367 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 ART4Q93070 314 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 SNF8Q96H20 258 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 PHF7Q9BWX1 381 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 CEP41Q9BYV8 373 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 FBXO10Q9UK96 956 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 TRHDEQ9UKU6 1024 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 OTOL1A6NHN0 477 aaPredicted RBP19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 C2CD4DB7Z1M9 353 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 CBX4O00257 560 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 CACNG3O60359 315 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 NUMBP49757 651 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 RENBPP51606 427 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 TNK2Q07912 1038 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 SMAD2Q15796 467 aaKnown RBP19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 ARHGEF18Q6ZSZ5 1173 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 NAT16Q8N8M0 369 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 NSMCE1Q8WV22 266 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 LRRC45Q96CN5 670 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 TEKT5Q96M29 485 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 ZNF599Q96NL3 588 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 XPO6Q96QU8 1125 aaKnown RBP19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 IL12RB2Q99665 862 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 FUT8Q9BYC5 575 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 FAM129AQ9BZQ8 928 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 ABCB8Q9NUT2 735 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 SHROOM3Q8TF72 1996 aa19.29■□□□□ 0.68
PDLIM3-202ENST00000284770 KIF26AQ9ULI4 1882 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 ITIH2P19823 946 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 GLDCP23378 1020 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 GDI1P31150 447 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 PLTPP55058 493 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 NR1H3Q13133 447 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 RUNX3Q13761 415 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 PLEKHG6Q3KR16 790 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 MARC1Q5VT66 337 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 ASTLQ6HA08 431 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 PID1Q7Z2X4 250 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 APCDD1Q8J025 514 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 CPA6Q8N4T0 437 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 DCAF4L2Q8NA75 395 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 GDAP1L1Q96MZ0 367 aa19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 C2orf49Q9BVC5 232 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 KLHL8Q9P2G9 620 aaPredicted RBP19.28■□□□□ 0.68
PDLIM3-202ENST00000284770 ZMPSTE24O75844 475 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 SLC10A7Q0GE19 358 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 PLCD3Q8N3E9 789 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 TEX26Q8N6G2 289 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 CNTD1Q8N815 330 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 ACDQ96AP0 544 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 ZNF419Q96HQ0 510 aaPredicted RBP19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 AGAP3Q96P47 875 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 RBM22Q9NW64 420 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 GGA2Q9UJY4 613 aa19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 INTS6Q9UL03 887 aaKnown RBP19.27■□□□□ 0.68
PDLIM3-202ENST00000284770 MYO18AQ92614 2054 aaKnown RBP19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 MYOFQ9NZM1 2061 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 ZBTB24O43167 697 aaPredicted RBP19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 SNAP91O60641 907 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 ARF5P84085 180 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 CALCOCO2Q13137 446 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 GAB4Q2WGN9 574 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 TMCO4Q5TGY1 634 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 LEKR1Q6ZMV7 388 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 KIAA0907Q7Z7F0 614 aaPredicted RBP19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 ETFBKMTQ8IXQ9 262 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 BBOF1Q8ND07 529 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 USP33Q8TEY7 942 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 FMO2Q99518 471 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms