RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 MLNP12872 115 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 DESP17661 470 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MIPP30301 263 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 NR1H2P55055 460 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 GPM6BQ13491 265 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TLR1Q15399 786 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 KLHDC10Q6PID8 442 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 DHRS4L2Q6PKH6 230 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 XYLT1Q86Y38 959 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 SLC25A41Q8N5S1 370 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MAFAQ8NHW3 353 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 JOSD2Q8TAC2 188 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 PPP4R1Q8TF05 950 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TFB1MQ8WVM0 346 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 ISL2Q96A47 359 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 CNDP1Q96KN2 507 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 RNF157Q96PX1 679 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 ACO2Q99798 780 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MSTO1Q9BUK6 570 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TARS2Q9BW92 718 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 APOL6Q9BWW8 343 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MRPL4Q9BYD3 311 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 SLC2A11Q9BYW1 496 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 FAM124BQ9H5Z6 455 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 EMCNQ9ULC0 261 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 ZNF510Q9Y2H8 683 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MTCH2Q9Y6C9 303 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 CYB561D2O14569 222 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 B4GALT3O60512 393 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 GCATO75600 419 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 PIAS1O75925 651 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 ACOT2P49753 483 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 INHBCP55103 352 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 HERC3Q15034 1050 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MDH1BQ5I0G3 518 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 RARS2Q5T160 578 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 SPOUT1Q5T280 376 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 PDPK2PQ6A1A2 396 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 RBM44Q6ZP01 1051 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 SETD3Q86TU7 594 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TRIM74Q86UV6 250 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TRIM73Q86UV7 250 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 NUP93Q8N1F7 819 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 RSPH1Q8WYR4 309 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TFAP2BQ92481 460 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 SORT1Q99523 831 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 C11orf84Q9BUA3 381 aaPredicted RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MRPL9Q9BYD2 267 aaKnown RBP10.53□□□□□ -0.72
UPF3B-201ENST00000276201 C10orf88Q9H8K7 445 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 PTPRHQ9HD43 1115 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TBC1D13Q9NVG8 400 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 USP18Q9UMW8 372 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 TNFSF13BQ9Y275 285 aa10.53□□□□□ -0.72
UPF3B-201ENST00000276201 MEI4A8MW99 385 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 TMEM114B3SHH9 223 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 GRM6O15303 877 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 INPPL1O15357 1258 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 H2AFYO75367 372 aaKnown RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 PROCP04070 461 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ITGB1P05556 798 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 COX4I1P13073 169 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ETS2P15036 469 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 LAG3P18627 525 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 AKAP5P24588 427 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 PBX3P40426 434 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 MLH1P40692 756 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ZNF143P52747 638 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 PSMC1P62191 440 aaKnown RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 DCTN2Q13561 401 aaKnown RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 DCAF4L1Q3SXM0 396 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 RALGPS1Q5JS13 557 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 SLC9A4Q6AI14 798 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 DENND1BQ6P3S1 775 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CYP4V2Q6ZWL3 525 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 MAVSQ7Z434 540 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CROCCP3Q8IVE0 287 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 FAM84AQ96KN4 292 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 BIRC8Q96P09 236 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CDT1Q9H211 546 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ZNF395Q9H8N7 513 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CLIC5Q9NZA1 410 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 HACD3Q9P035 362 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ZNHIT2Q9UHR6 403 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 LZTS1Q9Y250 596 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ATG2AQ2TAZ0 1938 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 A0A0J9YVX5 310 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CCDC195A0A1B0GUA6 201 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ARL5CA6NH57 179 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 DPYSL4O14531 572 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 CDK4P11802 303 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 MAGEA12P43365 314 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 EMP3P54852 163 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 ABCE1P61221 599 aaKnown RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 NIPAL4Q0D2K0 466 aa10.52□□□□□ -0.73
UPF3B-201ENST00000276201 FRG1Q14331 258 aaKnown RBP10.52□□□□□ -0.73
UPF3B-201ENST00000276201 KRT81Q14533 505 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms