RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ANO4Q32M45 955 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ZACNQ401N2 412 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 C10orf76Q5T2E6 689 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 RESP18Q5W5W9 173 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 GRAMD4Q6IC98 578 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 UNC5AQ6ZN44 842 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 PAQR9Q6ZVX9 377 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 BBS7Q8IWZ6 715 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 FUKQ8N0W3 1084 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 RBBP8NLQ8NC74 664 aaPredicted RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 SLC12A9Q9BXP2 914 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 SMYD3Q9H7B4 428 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 GP6Q9HCN6 339 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 EXOC1Q9NV70 894 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 SUSD2Q9UGT4 822 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 USP25Q9UHP3 1055 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ACSL6Q9UKU0 697 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 FRMD4BQ9Y2L6 1034 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 PI4KAP42356 2102 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ZFHX4Q86UP3 3567 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 MYO18AQ92614 2054 aaKnown RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 GON4LQ3T8J9 2241 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 NUDT19A8MXV4 375 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 PATE3B3GLJ2 98 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 RECKO95980 971 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ASS1P00966 412 aaKnown RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 HSP90AA1P07900 732 aaKnown RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 SERPINF2P08697 491 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 FAM200BP0CF97 657 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ENGP17813 658 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 PTGER3P43115 390 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 CDH8P55286 799 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ZNF445P59923 1031 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ACOT1Q86TX2 421 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 LSRQ86X29 649 aaPredicted RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 TMEFF1Q8IYR6 380 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 CHPFQ8IZ52 775 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 HDDC3Q8N4P3 179 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ZNF276Q8N554 614 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 TTC39CQ8N584 583 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 TMEM52Q8NDY8 209 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 SCAMP5Q8TAC9 235 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 SLC2A14Q8TDB8 520 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 RLN3Q8WXF3 142 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 FAXDC2Q96IV6 333 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 BBS2Q9BXC9 721 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 BLZF1Q9H2G9 400 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 FAM124BQ9H5Z6 455 aaPredicted RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 CCSER2Q9H7U1 834 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 CYP3A43Q9HB55 503 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 TNFRSF12AQ9NP84 129 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 DMAC2Q9NW81 257 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 KLHL14Q9P2G3 628 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 PILRBQ9UKJ0 227 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 SCML2Q9UQR0 700 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ZNF510Q9Y2H8 683 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 MYOFQ9NZM1 2061 aa10.15□□□□□ -0.78
LRTM1-201ENST00000273286 CFAP47Q6ZTR5 3102 aa10.15□□□□□ -0.78
LRTM1-201ENST00000273286 ASCC3Q8N3C0 2202 aaKnown RBP10.15□□□□□ -0.79
LRTM1-201ENST00000273286 A0A1W2PQD8 194 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 NEDD8-MDP1E9PL57 170 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 HNRNPLP14866 589 aaKnown RBP eCLIP10.15□□□□□ -0.79
LRTM1-201ENST00000273286 BMP7P18075 431 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 GABRG2P18507 467 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 CHKAP35790 457 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 NDST1P52848 882 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 ZNF33AQ06730 810 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 INCA1Q0VD86 236 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 SLC14A1Q13336 389 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 CUL4BQ13620 913 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 UAP1L1Q3KQV9 507 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 ANKRD39Q53RE8 183 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 SYCP2LQ5T4T6 812 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 EMC10Q5UCC4 262 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 SCARA5Q6ZMJ2 495 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 CCDC81Q6ZN84 652 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 INTS8Q75QN2 995 aaKnown RBP10.15□□□□□ -0.79
LRTM1-201ENST00000273286 TMC6Q7Z403 805 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 TMEM25Q86YD3 366 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 TMEM151BQ8IW70 566 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 CCDC150Q8NCX0 1101 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 SNX21Q969T3 373 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 HNRNPABQ99729 332 aaKnown RBP10.15□□□□□ -0.79
LRTM1-201ENST00000273286 SMOQ99835 787 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 GABRG3Q99928 467 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 DNAJC17Q9NVM6 304 aaKnown RBP10.15□□□□□ -0.79
LRTM1-201ENST00000273286 PCDHA7Q9UN72 937 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 WASF3Q9UPY6 502 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 TRAF3IP3Q9Y228 551 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 NFE2L3Q9Y4A8 694 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 NEUROG3Q9Y4Z2 214 aa10.15□□□□□ -0.79
LRTM1-201ENST00000273286 PCNX2A6NKB5 2137 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 TNRC6BQ9UPQ9 1833 aaKnown RBP10.14□□□□□ -0.79
LRTM1-201ENST00000273286 SCAMP3O14828 347 aaKnown RBP10.14□□□□□ -0.79
LRTM1-201ENST00000273286 CALUO43852 315 aaPredicted RBP10.14□□□□□ -0.79
LRTM1-201ENST00000273286 OPHN1O60890 802 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 VNN1O95497 513 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 NR3C1P04150 777 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms