RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 TARDBPQ13148 414 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM3-201ENST00000271850 STIM1Q13586 685 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 DLG2Q15700 870 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 HES3Q5TGS1 186 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 NAPEPLDQ6IQ20 393 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 TMPRSS12Q86WS5 348 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 TRIM69Q86WT6 500 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 SLC25A45Q8N413 288 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 SH2D3CQ8N5H7 860 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 ARRDC3Q96B67 414 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 CCDC34Q96HJ3 373 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 NOX5Q96PH1 765 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 SPAG5Q96R06 1193 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 FEM1AQ9BSK4 669 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 ERVMER34-1Q9H9K5 563 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 PLCB1Q9NQ66 1216 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 PRDM9Q9NQV7 894 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 GDF3Q9NR23 364 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 PIGVQ9NUD9 493 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM3-201ENST00000271850 ASNSD1Q9NWL6 643 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 UCKL1Q9NWZ5 548 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 DDIT4Q9NX09 232 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 VANGL2Q9ULK5 521 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 PCDHGC3Q9UN70 934 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D30Q9Y2I9 924 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.2□□□□□ -0.94
TPM3-201ENST00000271850 U3KQA8 63 aa9.2□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3DA0A087WVF3 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3IA0A087WXS9 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3EA0A087X179 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3KA0A087X1G2 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 A0A0D9SEW6 157 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3FA6NER0 549 aaPredicted RBP9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3LB9A6J9 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 MCF2LO15068 1137 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 DFNA5O60443 496 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 PAGE1O75459 146 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 DAB1O75553 588 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 MOCS3O95396 460 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 ITGAVP06756 1048 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3HP0C7X1 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 PON1P27169 355 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 SLC12A1Q13621 1099 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 FGL2Q14314 439 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 ARHGAP44Q17R89 818 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 RAB6CQ53S08 254 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 LCE2CQ5TA81 110 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3GQ6DHY5 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3CQ6IPX1 549 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 BRICD5Q6PL45 260 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 PCSK4Q6UW60 755 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 KDM7AQ6ZMT4 941 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 BNIPLQ7Z465 357 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 SLC47A2Q86VL8 602 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 TBC1D3Q8IZP1 549 aaPredicted RBP9.19□□□□□ -0.94
TPM3-201ENST00000271850 SLC22A18ASQ8N1D0 253 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 ATP6V0D2Q8N8Y2 350 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 MFSD2AQ8NA29 543 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 CHST14Q8NCH0 376 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
TPM3-201ENST00000271850 OR2A12Q8NGT7 310 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 PIP4K2CQ8TBX8 421 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 RFFLQ8WZ73 363 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 KLK6Q92876 244 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 NT5C3BQ969T7 300 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 PPP1R13BQ96KQ4 1090 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 RPRD1AQ96P16 312 aaPredicted RBP9.19□□□□□ -0.94
TPM3-201ENST00000271850 RAB6CQ9H0N0 254 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 FAM204AQ9H8W3 233 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 FZD3Q9NPG1 666 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 ARHGEF38Q9NXL2 777 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 VPS51Q9UID3 782 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 ZFR2Q9UPR6 939 aaKnown RBP9.19□□□□□ -0.94
TPM3-201ENST00000271850 HS3ST2Q9Y278 367 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 CEP83Q9Y592 693 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 RAI2Q9Y5P3 530 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 ACTL7AQ9Y615 435 aa9.19□□□□□ -0.94
TPM3-201ENST00000271850 BICDL2A1A5D9 508 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 GOLGA6L4A6NEF3 574 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 J3QL48 77 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 FOXN3O00409 490 aaPredicted RBP9.18□□□□□ -0.94
TPM3-201ENST00000271850 CASC3O15234 703 aaKnown RBP9.18□□□□□ -0.94
TPM3-201ENST00000271850 SLC7A4O43246 635 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 MED7O43513 233 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 HSF2BPO75031 334 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 GNA14O95837 355 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 CD160O95971 181 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 GLI1P08151 1106 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 MYF5P13349 255 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 PRLRP16471 622 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 ABCB4P21439 1286 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 FECHP22830 423 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 RRM1P23921 792 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 CCR1P32246 355 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 EIF2S3P41091 472 aaKnown RBP9.18□□□□□ -0.94
TPM3-201ENST00000271850 PPP1R2P41236 205 aa9.18□□□□□ -0.94
TPM3-201ENST00000271850 CDK17Q00537 523 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms