RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LIPMQ5VYY2 423 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 CCNYL1Q8N7R7 359 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 APBA2Q99767 749 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 OMDQ99983 421 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 ADA2Q9NZK5 511 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 LMCD1Q9NZU5 365 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 RUVBL2Q9Y230 463 aaKnown RBP27.96■■■□□ 2.07
CBX4-201ENST00000269397 CDYLQ9Y232 598 aa27.96■■■□□ 2.07
CBX4-201ENST00000269397 M0QYT0 321 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 PENKP01210 267 aaPredicted RBP27.95■■■□□ 2.07
CBX4-201ENST00000269397 RPS12P25398 132 aaKnown RBP27.95■■■□□ 2.07
CBX4-201ENST00000269397 NMBRP28336 390 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 NDUFV1P49821 464 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 RABGGTBP53611 331 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 TMEM62Q0P6H9 643 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 IL23RQ5VWK5 629 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 SYPL2Q5VXT5 272 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 PCDH20Q8N6Y1 951 aaKnown RBP27.95■■■□□ 2.07
CBX4-201ENST00000269397 ZFRQ96KR1 1074 aaKnown RBP27.95■■■□□ 2.07
CBX4-201ENST00000269397 ZNF696Q9H7X3 374 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 TLK1Q9UKI8 766 aa27.95■■■□□ 2.07
CBX4-201ENST00000269397 PRSS51A0A1B0GVH4 220 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 EEF2KO00418 725 aaKnown RBP27.95■■■□□ 2.06
CBX4-201ENST00000269397 AP2A1O95782 977 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 ZNF286BP0CG31 522 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 MAF1Q9H063 256 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 PCDHAC1Q9H158 963 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 COPG1Q9Y678 874 aaKnown RBP27.95■■■□□ 2.06
CBX4-201ENST00000269397 PDLIM1O00151 329 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 TKTP29401 623 aaKnown RBP27.95■■■□□ 2.06
CBX4-201ENST00000269397 ARHGAP17Q68EM7 881 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 LSMEM2Q8N112 164 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 TRPM4Q8TD43 1214 aa27.95■■■□□ 2.06
CBX4-201ENST00000269397 NFKBIEO00221 500 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 VAPBO95292 243 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 SLC26A2P50443 739 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 USP10Q14694 798 aaKnown RBP27.94■■■□□ 2.06
CBX4-201ENST00000269397 ZYG11AQ6WRX3 759 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 MLPHQ9BV36 600 aaPredicted RBP27.94■■■□□ 2.06
CBX4-201ENST00000269397 EFCAB1Q9HAE3 211 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 ZBTB26Q9HCK0 441 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 BCAS2O75934 225 aaPredicted RBP27.94■■■□□ 2.06
CBX4-201ENST00000269397 FAM200BP0CF97 657 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 SLC5A2P31639 672 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 VGLL4Q14135 290 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 KIZQ2M2Z5 673 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 GK5Q6ZS86 529 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 PIGZQ86VD9 579 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 TMEM102Q8N9M5 508 aaPredicted RBP27.94■■■□□ 2.06
CBX4-201ENST00000269397 GRIN3AQ8TCU5 1115 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 EME1Q96AY2 570 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 SGF29Q96ES7 293 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 ZNF385DQ9H6B1 395 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 PIGVQ9NUD9 493 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 DMTF1Q9Y222 760 aa27.94■■■□□ 2.06
CBX4-201ENST00000269397 ACOT8O14734 319 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 TIMM44O43615 452 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 STRNO43815 780 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 GNL1P36915 607 aaPredicted RBP27.93■■■□□ 2.06
CBX4-201ENST00000269397 SH3D19Q5HYK7 790 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 FAM219BQ5XKK7 198 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 FSTL5Q8N475 847 aaPredicted RBP27.93■■■□□ 2.06
CBX4-201ENST00000269397 RNF169Q8NCN4 708 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 CATSPER1Q8NEC5 780 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 C1QTNF1Q9BXJ1 281 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 HEMK1Q9Y5R4 338 aaPredicted RBP27.93■■■□□ 2.06
CBX4-201ENST00000269397 TCAF2A6NFQ2 919 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 CLDN5O00501 218 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 ERCC2P18074 760 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 CD68P34810 354 aaPredicted RBP27.93■■■□□ 2.06
CBX4-201ENST00000269397 SNX31Q8N9S9 440 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 CEP70Q8NHQ1 597 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 ZNF512Q96ME7 567 aaPredicted RBP27.93■■■□□ 2.06
CBX4-201ENST00000269397 EIF2AQ9BY44 585 aaKnown RBP27.93■■■□□ 2.06
CBX4-201ENST00000269397 TXNRD2Q9NNW7 524 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 ANLNQ9NQW6 1124 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 RHBDL2Q9NX52 303 aa27.93■■■□□ 2.06
CBX4-201ENST00000269397 C7orf72A4D263 438 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 KCNU1A8MYU2 1149 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 CYP2C8P10632 490 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 NSUN2Q08J23 767 aaKnown RBP eCLIP27.92■■■□□ 2.06
CBX4-201ENST00000269397 PRKAA1Q13131 559 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 APOFQ13790 326 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 PTK2BQ14289 1009 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 TMEM259Q4ZIN3 620 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 HFE2Q6ZVN8 426 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 ZNF410Q86VK4 478 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 SLC41A1Q8IVJ1 513 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 SULF1Q8IWU6 871 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 CPSF7Q8N684 471 aaKnown RBP27.92■■■□□ 2.06
CBX4-201ENST00000269397 PPP1R13LQ8WUF5 828 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 PRDM16Q9HAZ2 1276 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 CASS4Q9NQ75 786 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 SETD4Q9NVD3 440 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 RCOR3Q9P2K3 495 aaPredicted RBP27.92■■■□□ 2.06
CBX4-201ENST00000269397 H2AFYO75367 372 aaKnown RBP27.92■■■□□ 2.06
CBX4-201ENST00000269397 BEST1O76090 585 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 CDK4P11802 303 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 HPCAP84074 193 aa27.92■■■□□ 2.06
CBX4-201ENST00000269397 ZBTB17Q13105 803 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms