RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 UGT2A3Q6UWM9 527 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 KDELC2Q7Z4H8 507 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 ARPINQ7Z6K5 226 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 SLC41A1Q8IVJ1 513 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 SPATA22Q8NHS9 363 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 ISL2Q96A47 359 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 DCPSQ96C86 337 aaKnown RBP22.54■■□□□ 1.2
CDR2-201ENST00000268383 FAM96AQ9H5X1 160 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 FAM124BQ9H5Z6 455 aaPredicted RBP22.54■■□□□ 1.2
CDR2-201ENST00000268383 OCEL1Q9H607 264 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 RUVBL2Q9Y230 463 aaKnown RBP22.54■■□□□ 1.2
CDR2-201ENST00000268383 GRID2O43424 1007 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 HUS1O60921 280 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 TFEBP19484 476 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 CYP2B6P20813 491 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 GABRB3P28472 473 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 ZNF280DQ6N043 979 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 NOTUMQ6P988 496 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 DENND6AQ8IWF6 608 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 PQLC1Q8N2U9 271 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 NT5C3BQ969T7 300 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 MROH8Q9H579 483 aa22.54■■□□□ 1.2
CDR2-201ENST00000268383 USP17L7P0C7H9 530 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 NPR3P17342 541 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 SMPD1P17405 629 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 CTBP1Q13363 440 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 CEACAM7Q14002 265 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 USP10Q14694 798 aaKnown RBP22.53■■□□□ 1.2
CDR2-201ENST00000268383 PTAR1Q7Z6K3 402 aaPredicted RBP22.53■■□□□ 1.2
CDR2-201ENST00000268383 SNX31Q8N9S9 440 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 FTHL17Q9BXU8 183 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 RHOBTB2Q9BYZ6 727 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 WDR6Q9NNW5 1121 aaKnown RBP22.53■■□□□ 1.2
CDR2-201ENST00000268383 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.53■■□□□ 1.2
CDR2-201ENST00000268383 DERAQ9Y315 318 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 PMLP29590 882 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 TAF6P49848 677 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 LILRA4P59901 499 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 FLOT2Q14254 428 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 SEL1L3Q68CR1 1132 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 KCTD11Q693B1 232 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 ARHGAP36Q6ZRI8 547 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 RPS27LQ71UM5 84 aaKnown RBP22.53■■□□□ 1.2
CDR2-201ENST00000268383 LILRA2Q8N149 483 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 GPC2Q8N158 579 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 GALNT4Q8N4A0 578 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 CCNYL1Q8N7R7 359 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 ZFP42Q96MM3 310 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 NPAS2Q99743 824 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 RGS17Q9UGC6 210 aaPredicted RBP22.53■■□□□ 1.2
CDR2-201ENST00000268383 ADAM28Q9UKQ2 775 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 STAP1Q9ULZ2 295 aa22.53■■□□□ 1.2
CDR2-201ENST00000268383 NCAM1P13591 858 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 SCNN1AP37088 669 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 RPL14P50914 215 aaKnown RBP22.52■■□□□ 1.2
CDR2-201ENST00000268383 MPP1Q00013 466 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 ZNF410Q86VK4 478 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 KYQ8NBH2 561 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 VCX3BQ9H321 246 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 DDIT4Q9NX09 232 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 APPL1Q9UKG1 709 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 TBC1D30Q9Y2I9 924 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 LTBP3Q9NS15 1303 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 SNAI1O95863 264 aaPredicted RBP22.52■■□□□ 1.2
CDR2-201ENST00000268383 MPOP05164 745 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 CHN2P52757 468 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 SNAPC2Q13487 334 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 OGFRL1Q5TC84 451 aaPredicted RBP22.52■■□□□ 1.2
CDR2-201ENST00000268383 FSTL5Q8N475 847 aaPredicted RBP22.52■■□□□ 1.2
CDR2-201ENST00000268383 BHLHE22Q8NFJ8 381 aaPredicted RBP22.52■■□□□ 1.2
CDR2-201ENST00000268383 LENG1Q96BZ8 264 aaPredicted RBP22.52■■□□□ 1.2
CDR2-201ENST00000268383 TMA16Q96EY4 203 aaKnown RBP22.52■■□□□ 1.2
CDR2-201ENST00000268383 C1QTNF1Q9BXJ1 281 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 STK39Q9UEW8 545 aa22.52■■□□□ 1.2
CDR2-201ENST00000268383 HDAC3O15379 428 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 RTN3O95197 1032 aaPredicted RBP22.51■■□□□ 1.19
CDR2-201ENST00000268383 MT-CYBP00156 380 aaPredicted RBP22.51■■□□□ 1.19
CDR2-201ENST00000268383 PTPN1P18031 435 aaKnown RBP22.51■■□□□ 1.19
CDR2-201ENST00000268383 POU6F1Q14863 301 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 LSMEM2Q8N112 164 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 DNAJB3Q8WWF6 145 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 CNBD2Q96M20 576 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 TLK1Q9UKI8 766 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 PSMD13Q9UNM6 376 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 RGSL1A5PLK6 1076 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 MEIS3P2A8K0S8 358 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 CXCL11O14625 94 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 CASQ2O14958 399 aaPredicted RBP22.51■■□□□ 1.19
CDR2-201ENST00000268383 AHSGP02765 367 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 MMP3P08254 477 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 THRAP10827 490 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 CYLC2Q14093 348 aaPredicted RBP22.51■■□□□ 1.19
CDR2-201ENST00000268383 CEP97Q8IW35 865 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 MFSD6LQ8IWD5 586 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 ZSCAN18Q8TBC5 510 aaPredicted RBP22.51■■□□□ 1.19
CDR2-201ENST00000268383 HNRNPABQ99729 332 aaKnown RBP22.51■■□□□ 1.19
CDR2-201ENST00000268383 RAP2CQ9Y3L5 183 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 NEMP2A6NFY4 417 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 TMEM114B3SHH9 223 aa22.51■■□□□ 1.19
CDR2-201ENST00000268383 DNAJA2O60884 412 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms