RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MYL4P12829 197 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 EPCAMP16422 314 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 PTPN2P17706 415 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 CCR2P41597 374 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 GEMIN4P57678 1058 aaKnown RBP16.68■□□□□ 0.26
TPM1-201ENST00000267996 GPM6BQ13491 265 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 UNC5AQ6ZN44 842 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 HTR3DQ70Z44 454 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 SETD3Q86TU7 594 aaPredicted RBP16.68■□□□□ 0.26
TPM1-201ENST00000267996 CCNJLQ8IV13 435 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 CYP4X1Q8N118 509 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 OR52K2Q8NGK3 314 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 SHKBP1Q8TBC3 707 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 STAMBPL1Q96FJ0 436 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 CFAP36Q96G28 342 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 ZNF599Q96NL3 588 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 CYTH2Q99418 400 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 NAT9Q9BTE0 207 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 SLC46A2Q9BY10 475 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 SLC25A51Q9H1U9 297 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 SP110Q9HB58 689 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 HCFC1R1Q9NWW0 138 aa16.68■□□□□ 0.26
TPM1-201ENST00000267996 YBX2Q9Y2T7 364 aaKnown RBP16.68■□□□□ 0.26
TPM1-201ENST00000267996 SOBPA7XYQ1 873 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 MOSPD3O75425 235 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 PRKCHP24723 683 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.26
TPM1-201ENST00000267996 MGAT1P26572 445 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 HOXD9P28356 352 aaPredicted RBP16.67■□□□□ 0.26
TPM1-201ENST00000267996 ATP5DP30049 168 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 STX2P32856 288 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 PPP2R2AP63151 447 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 SLC10A7Q0GE19 358 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 MARC1Q5VT66 337 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 EXOC3L1Q86VI1 746 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 LEMD2Q8NC56 503 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 OR52K1Q8NGK4 314 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 CHD7Q9P2D1 2997 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 DNMT3BQ9UBC3 853 aaKnown RBP16.67■□□□□ 0.26
TPM1-201ENST00000267996 ZNF510Q9Y2H8 683 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 MAD1L1Q9Y6D9 718 aa16.67■□□□□ 0.26
TPM1-201ENST00000267996 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.66■□□□□ 0.26
TPM1-201ENST00000267996 POC1B-GALNT4F8VUJ3 575 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 AP3B1O00203 1094 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 TSPAN3O60637 253 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 CKMP06732 381 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 GJA1P17302 382 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 HPDP32754 393 aaPredicted RBP16.66■□□□□ 0.26
TPM1-201ENST00000267996 ADRA1AP35348 466 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 GEMP55040 296 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 SESN2P58004 480 aaPredicted RBP16.66■□□□□ 0.26
TPM1-201ENST00000267996 ZNF177Q13360 481 aaPredicted RBP16.66■□□□□ 0.26
TPM1-201ENST00000267996 OLIG2Q13516 323 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 STXBP5Q5T5C0 1151 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 NAPEPLDQ6IQ20 393 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 CXorf57Q6NSI4 855 aaKnown RBP16.66■□□□□ 0.26
TPM1-201ENST00000267996 ADGRD1Q6QNK2 874 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 ZNF783Q6ZMS7 281 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 LINC00523Q86TU6 105 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 SPATA22Q8NHS9 363 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 GSDMBQ8TAX9 411 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 NSMCE1Q8WV22 266 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 TADA1Q96BN2 335 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 ACE2Q9BYF1 805 aaPredicted RBP16.66■□□□□ 0.26
TPM1-201ENST00000267996 LSM7Q9UK45 103 aaKnown RBP16.66■□□□□ 0.26
TPM1-201ENST00000267996 ARHGAP26Q9UNA1 814 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 NOTCH4Q99466 2003 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 CHD9Q3L8U1 2897 aa16.66■□□□□ 0.26
TPM1-201ENST00000267996 A0A0D9SEW6 157 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 KDELR3O43731 214 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 SHOX2O60902 331 aaPredicted RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 USP12O75317 370 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 ALDH1A2O94788 518 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 NPY2RP49146 381 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 EFTUD2Q15029 972 aaKnown RBP eCLIP16.65■□□□□ 0.261e-5■■■□□ 16.7
TPM1-201ENST00000267996 SKIDA1Q1XH10 827 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 TMCO4Q5TGY1 634 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 PRPF39Q86UA1 669 aaKnown RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 CPXM2Q8N436 756 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 HJURPQ8NCD3 748 aaPredicted RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 OR7D4Q8NG98 312 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 IMP4Q96G21 291 aaKnown RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 SYBUQ9NX95 663 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 ZDHHC7Q9NXF8 308 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 MOCS1Q9NZB8 636 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 UBP1Q9NZI7 540 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 CFAP97Q9P2B7 532 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 PSMC3IPQ9P2W1 217 aaPredicted RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 ACTL7BQ9Y614 415 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 A6NNZ2 444 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 PAPLNO95428 1278 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 MT-CYBP00156 380 aaPredicted RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 RHOP08100 348 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 RHOCP08134 193 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 PGAM1P18669 254 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 ATP1A2P50993 1020 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 NR1H3Q13133 447 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 LBRQ14739 615 aaKnown RBP16.65■□□□□ 0.26
TPM1-201ENST00000267996 TUBB8Q3ZCM7 444 aa16.65■□□□□ 0.26
TPM1-201ENST00000267996 KBTBD12Q3ZCT8 623 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms