RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PRPSAP1Q14558 356 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 PM20D1Q6GTS8 502 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 MRPL10Q7Z7H8 261 aaKnown RBP13.14□□□□□ -0.31
CPSF6-201ENST00000266679 SERINC5Q86VE9 423 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 ACVR1CQ8NER5 493 aa13.14□□□□□ -0.31
CPSF6-201ENST00000266679 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.14□□□□□ -0.31
CPSF6-201ENST00000266679 NYNRINQ9P2P1 1898 aaKnown RBP13.14□□□□□ -0.31
CPSF6-201ENST00000266679 A0A096LPK6 155 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 PSMG1O95456 288 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 NPY2RP49146 381 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 COG7P83436 770 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 TBCCQ15814 346 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 CCDC153Q494R4 210 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 TRIM68Q6AZZ1 485 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 FAM171BQ6P995 826 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 DCLRE1AQ6PJP8 1040 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 LRRTM3Q86VH5 581 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 TMPRSS6Q8IU80 811 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 SPATA22Q8NHS9 363 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 STMN2Q93045 179 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 ISL2Q96A47 359 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 CLPTM1LQ96KA5 538 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 ACBD6Q9BR61 282 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 SIKE1Q9BRV8 207 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 PADI3Q9ULW8 664 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 SOX13Q9UN79 622 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 F8W810 466 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 MSI1O43347 362 aaKnown RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 ATP5BP06576 529 aaKnown RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 GRK2P25098 689 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 THOC5Q13769 683 aaKnown RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 FRG1Q14331 258 aaKnown RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 VWA5B1Q5TIE3 1220 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 CD300LGQ6UXG3 332 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 ATPAF2Q8N5M1 289 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 CNTD1Q8N815 330 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 URGCPQ8TCY9 931 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 DTX3LQ8TDB6 740 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 VAT1Q99536 393 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 PKMYT1Q99640 499 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 OXCT2Q9BYC2 517 aaPredicted RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 IL22Q9GZX6 179 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 PLA2G4CQ9UP65 541 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 NEU3Q9UQ49 428 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 APOBEC2Q9Y235 224 aaKnown RBP13.13□□□□□ -0.31
CPSF6-201ENST00000266679 EYSQ5T1H1 3165 aa13.13□□□□□ -0.31
CPSF6-201ENST00000266679 MPOP05164 745 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 ITGB1P05556 798 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 SAT1P21673 171 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 IDH3AP50213 366 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 CSE1LP55060 971 aaKnown RBP13.12□□□□□ -0.31
CPSF6-201ENST00000266679 CDH17Q12864 832 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 LRRC26Q2I0M4 334 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 RABGAP1LQ5R372 815 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 OVOS1Q6IE37 1185 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 NAPEPLDQ6IQ20 393 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 POU5F2Q8N7G0 328 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 VPS39Q96JC1 886 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 FAM167BQ9BTA0 163 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 THTPAQ9BU02 230 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 DNAJC28Q9NX36 388 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 SFMBT1Q9UHJ3 866 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 SLC39A10Q9ULF5 831 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 IRAK2O43187 625 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 TIMM44O43615 452 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 MAGEC1O60732 1142 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 CIB2O75838 187 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 C2P06681 752 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 COL6A1P12109 1028 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 ERFP50548 548 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 RAP1GDS1P52306 607 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 PGGT1BP53609 377 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
CPSF6-201ENST00000266679 GRM3Q14832 879 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 DNAL1Q4LDG9 190 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 NAPRTQ6XQN6 538 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 ARHGAP12Q8IWW6 846 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 SCUBE1Q8IWY4 988 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 IPMKQ8NFU5 416 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
CPSF6-201ENST00000266679 RSPH1Q8WYR4 309 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 NAF1Q96HR8 494 aaKnown RBP13.12□□□□□ -0.31
CPSF6-201ENST00000266679 TBL1YQ9BQ87 522 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 FICDQ9BVA6 458 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 OSBPL2Q9H1P3 480 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 STN1Q9H668 368 aaKnown RBP13.12□□□□□ -0.31
CPSF6-201ENST00000266679 STOML1Q9UBI4 398 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 NUDT5Q9UKK9 219 aa13.12□□□□□ -0.31
CPSF6-201ENST00000266679 FNDC1Q4ZHG4 1894 aaPredicted RBP13.12□□□□□ -0.31
CPSF6-201ENST00000266679 MAGEB16A2A368 324 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 EIF4E1BA6NMX2 242 aaKnown RBP13.11□□□□□ -0.31
CPSF6-201ENST00000266679 G3V2L1 256 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 HSPA4LO95757 839 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 MT-CYBP00156 380 aaPredicted RBP13.11□□□□□ -0.31
CPSF6-201ENST00000266679 IGLV3-25P01717 112 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 CYP11A1P05108 521 aa13.11□□□□□ -0.31
CPSF6-201ENST00000266679 AOC1P19801 751 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms