RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 OR8D1Q8WZ84 308 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 SLC6A18Q96N87 628 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 HAPLN3Q96S86 360 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 PSMB7Q99436 277 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 CDC6Q99741 560 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 ACE2Q9BYF1 805 aaPredicted RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 MUC3BQ9H195 1237 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 VPS16Q9H269 839 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 GANQ9H2C0 597 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 TOR4AQ9NXH8 423 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 SLC25A13Q9UJS0 675 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 NOCTQ9UK39 431 aaKnown RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 TPX2Q9ULW0 747 aaKnown RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
VPS41-201ENST00000265745 HS3ST2Q9Y278 367 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 PAXBP1Q9Y5B6 917 aa9.98□□□□□ -0.81
VPS41-201ENST00000265745 A0A0D9SEW6 157 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 A0A1W2PR77 199 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 LRRC10BA6NIK2 292 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 GOLGA8SH3BPF8 625 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 PLK4O00444 970 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 ALOX15BO15296 676 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 SLC7A4O43246 635 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 SNAP91O60641 907 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 RTN2O75298 545 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 GFPT2O94808 682 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 ENDOD1O94919 500 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CAPNS1P04632 268 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CYP1A1P04798 512 aaPredicted RBP9.97□□□□□ -0.81
VPS41-201ENST00000265745 ATXN1LP0C7T5 689 aaKnown RBP9.97□□□□□ -0.81
VPS41-201ENST00000265745 CHRNB2P17787 502 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 MMP8P22894 467 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CD38P28907 300 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 KLK7P49862 253 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CCT8P50990 548 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 C21orf59P57076 290 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 JAM2P57087 298 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 POLR2FP61218 127 aaKnown RBP9.97□□□□□ -0.81
VPS41-201ENST00000265745 PPP2CBP62714 309 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 PPP2CAP67775 309 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 KRT83P78385 493 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CDR2Q01850 454 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 PRAMEF14Q5SWL7 426 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 LRRC31Q6UY01 552 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CCNI2Q6ZMN8 369 aaPredicted RBP9.97□□□□□ -0.81
VPS41-201ENST00000265745 ZNF677Q86XU0 584 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 GPT2Q8TD30 523 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 SLC20A1Q8WUM9 679 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 SKA1Q96BD8 255 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 SERAC1Q96JX3 654 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CFAP57Q96MR6 1250 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 C2orf49Q9BVC5 232 aaPredicted RBP9.97□□□□□ -0.81
VPS41-201ENST00000265745 AASDHPPTQ9NRN7 309 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 FAM207AQ9NSI2 230 aaPredicted RBP9.97□□□□□ -0.81
VPS41-201ENST00000265745 FANCLQ9NW38 375 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 MPP6Q9NZW5 540 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 ARHGAP20Q9P2F6 1191 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 ZNF212Q9UDV6 495 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 VPS51Q9UID3 782 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 ASPMQ8IZT6 3477 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 CKAP5Q14008 2032 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 NUMA1Q14980 2115 aa9.97□□□□□ -0.81
VPS41-201ENST00000265745 TNRC6BQ9UPQ9 1833 aaKnown RBP9.96□□□□□ -0.81
VPS41-201ENST00000265745 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 ILVBLA1L0T0 632 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 E9PAM4 449 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 K7ERQ8 282 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 TLR4O00206 839 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 EPHB6O15197 1021 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 TNFSF14O43557 240 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 PLRG1O43660 514 aaKnown RBP9.96□□□□□ -0.82
VPS41-201ENST00000265745 SRGAP2O75044 1071 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 RHOCP08134 193 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 SRCP12931 536 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 OR1E1P30953 314 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 SOX5P35711 763 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 ANP32AP39687 249 aaKnown RBP9.96□□□□□ -0.82
VPS41-201ENST00000265745 GRK6P43250 576 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 FMO1Q01740 532 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 CNTN1Q12860 1018 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 SHBQ15464 509 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 POM121L1PQ3SYA9 428 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 FKBP15Q5T1M5 1219 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 C6orf118Q5T5N4 469 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 AGBL4Q5VU57 503 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 TFAP2DQ7Z6R9 452 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 PRPF39Q86UA1 669 aaKnown RBP9.96□□□□□ -0.82
VPS41-201ENST00000265745 FAM131BQ86XD5 332 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 EMC1Q8N766 993 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 DCAF4L2Q8NA75 395 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 ATP11CQ8NB49 1132 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 TMIEQ8NEW7 156 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 OR2A12Q8NGT7 310 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 PIP4K2CQ8TBX8 421 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 ELF4Q99607 663 aaPredicted RBP9.96□□□□□ -0.82
VPS41-201ENST00000265745 NLRC4Q9NPP4 1024 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 SIK3Q9Y2K2 1263 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms