RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 CHRM3P20309 590 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 GABRB2P47870 512 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 GEMP55040 296 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 MAXP61244 160 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 NET1Q7Z628 596 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ZBED3Q96IU2 234 aaPredicted RBP20.16■□□□□ 0.82
CSPG5-201ENST00000264723 PRPF18Q99633 342 aaKnown RBP20.16■□□□□ 0.82
CSPG5-201ENST00000264723 SUN2Q9UH99 717 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 PADI3Q9ULW8 664 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 TK2O00142 265 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 PSMD3O43242 534 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 PLIN3O60664 434 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ZRANB3Q5FWF4 1079 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 ULK4Q96C45 1275 aa20.16■□□□□ 0.82
CSPG5-201ENST00000264723 SMNDC1O75940 238 aaKnown RBP eCLIP20.15■□□□□ 0.82
CSPG5-201ENST00000264723 ATG7O95352 703 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 HSPA8P11142 646 aaKnown RBP20.15■□□□□ 0.82
CSPG5-201ENST00000264723 ESRRGP62508 458 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 FUT11Q495W5 492 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 GRTP1Q5TC63 336 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF280DQ6N043 979 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 ANKRD23Q86SG2 305 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 PSTKQ8IV42 348 aaKnown RBP20.15■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF567Q8N184 647 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 OR6Y1Q8NGX8 325 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 SPATA22Q8NHS9 363 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 ZNF333Q96JL9 665 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 CPNE1Q99829 537 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 DSEQ9UL01 958 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 BCLAF3A2AJT9 711 aaKnown RBP20.15■□□□□ 0.82
CSPG5-201ENST00000264723 SUPT3HO75486 399 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 OR1E1P30953 314 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 L1CAMP32004 1257 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 LENG8Q96PV6 779 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-201ENST00000264723 LATS2Q9NRM7 1088 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 UTP6Q9NYH9 597 aaKnown RBP20.15■□□□□ 0.82
CSPG5-201ENST00000264723 ADGRA2Q96PE1 1338 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 PIRTP0C851 137 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 PEX2P28328 305 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 CCL23P55773 120 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 PLOD1Q02809 727 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-201ENST00000264723 WASHC5Q12768 1159 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 SYPL2Q5VXT5 272 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 TMEM198Q66K66 360 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 DHDDSQ86SQ9 333 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 RELL1Q8IUW5 271 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 TP53INP2Q8IXH6 220 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 COPG2Q9UBF2 871 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 SLC30A1Q9Y6M5 507 aa20.15■□□□□ 0.82
CSPG5-201ENST00000264723 F5H5T6 163 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 CCL22O00626 93 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 CLPTM1O96005 669 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 CKMP06732 381 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 SLC2A3P11169 496 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 GSTT1P30711 240 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 BHLHE22Q8NFJ8 381 aaPredicted RBP20.14■□□□□ 0.82
CSPG5-201ENST00000264723 USP29Q9HBJ7 922 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 CRYL1Q9Y2S2 319 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 PCDHB5Q9Y5E4 795 aa20.14■□□□□ 0.82
CSPG5-201ENST00000264723 SLX4Q8IY92 1834 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 ASGR1P07306 291 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 IRF9Q00978 393 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 CDH17Q12864 832 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 C7orf26Q96N11 449 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 CCT7Q99832 543 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 GPAMQ9HCL2 828 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 H0Y626 953 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 CHRNGP07510 517 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 EMID1Q96A84 441 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-201ENST00000264723 GPR63Q9BZJ6 419 aa20.14■□□□□ 0.81
CSPG5-201ENST00000264723 BHMG1C9JSJ3 638 aaPredicted RBP20.13■□□□□ 0.81
CSPG5-201ENST00000264723 AP3B1O00203 1094 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 MDM4O15151 490 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 DDHD2O94830 711 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 TGDSO95455 350 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 ADRA1BP35368 520 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 ATAD1Q8NBU5 361 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 GRIP2Q9C0E4 1043 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 PIDD1Q9HB75 910 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 PTPN7P35236 360 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 TMTC4Q5T4D3 741 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 ARCQ7LC44 396 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 TMEM86AQ8N2M4 240 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 ANKRD27Q96NW4 1050 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 NPAS2Q99743 824 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 EBF3Q9H4W6 596 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.13■□□□□ 0.81
CSPG5-201ENST00000264723 GNGT2O14610 69 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 SNAI1O95863 264 aaPredicted RBP20.13■□□□□ 0.81
CSPG5-201ENST00000264723 TSHRP16473 764 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 CCR10P46092 362 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 SLC10A2Q12908 348 aaPredicted RBP20.13■□□□□ 0.81
CSPG5-201ENST00000264723 ZNF177Q13360 481 aaPredicted RBP20.13■□□□□ 0.81
CSPG5-201ENST00000264723 SLC25A52Q3SY17 297 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 TNFAIP8L3Q5GJ75 292 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 ARHGAP18Q8N392 663 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 PHTF2Q8N3S3 785 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 MAB21L3Q8N8X9 362 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 SNX27Q96L92 541 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 XPR1Q9UBH6 696 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms