RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PCDHGA7Q9Y5G6 932 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 WDR81Q562E7 1941 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 SCN9AQ15858 1988 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 E2F8A0AVK6 867 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 COL6A2P12110 1019 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ICAM3P32942 547 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 SLC5A3P53794 718 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 NSUN2Q08J23 767 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ANO4Q32M45 955 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ATF7IP2Q5U623 682 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 C1orf127Q8N9H9 656 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ANKRD52Q8NB46 1076 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 LPGAT1Q92604 370 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 PLEKHA8Q96JA3 519 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 DOK1Q99704 481 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 TRIM15Q9C019 465 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 SNX25Q9H3E2 840 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 CXorf21Q9HAI6 301 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 LRRC4Q9HBW1 653 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 SPAG4Q9NPE6 437 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ANLNQ9NQW6 1124 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 TMEM9Q9P0T7 183 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 HMGXB4Q9UGU5 601 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
CHMP2B-201ENST00000263780 ANKRD31Q8N7Z5 1873 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 IGKV6D-21A0A0A0MT36 114 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 RNF103O00237 685 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 E2F6O75461 281 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 SERPINB7O75635 380 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 CSPG5O95196 566 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 LTFP02788 710 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 C7P10643 843 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 MYF6P23409 242 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 GLUD2P49448 558 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 PFKPQ01813 784 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 INCA1Q0VD86 236 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 MOGQ16653 247 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 MTX3Q5HYI7 312 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 GLRA4Q5JXX5 417 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 NCBP2-AS2Q69YL0 99 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 STYK1Q6J9G0 422 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 C16orf87Q6PH81 154 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 AKT1S1Q96B36 256 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 ZNF669Q96BR6 464 aaPredicted RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 FAM167AQ96KS9 214 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 PPP1R36Q96LQ0 422 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 C8orf37Q96NL8 207 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 CIB1Q99828 191 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 ARMC1Q9NVT9 282 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 EBF1Q9UH73 591 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 ZDHHC2Q9UIJ5 367 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 ACKR2O00590 384 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 TRIM24O15164 1050 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 NAGLUP54802 743 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 OXCT1P55809 520 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 GSTM4Q03013 218 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 LAMTOR4Q0VGL1 99 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 TGFBIQ15582 683 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 KIZQ2M2Z5 673 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 INTS11Q5TA45 600 aaKnown RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 DCDC5Q6ZRR9 648 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 ANKRD23Q86SG2 305 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 TMEM110Q86TL2 294 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 ZNF786Q8N393 782 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 SCYL1Q96KG9 808 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 CNDP2Q96KP4 475 aaKnown RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 SLC29A1Q99808 456 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 YTHDF1Q9BYJ9 559 aaKnown RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 NOL11Q9H8H0 719 aaKnown RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 FADS3Q9Y5Q0 445 aa12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 HEMK1Q9Y5R4 338 aaPredicted RBP12.58□□□□□ -0.4
CHMP2B-201ENST00000263780 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 NPHS1O60500 1241 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 ITGB3P05106 788 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 CYP2C9P11712 490 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 CD1EP15812 388 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 DCKP27707 260 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 BCAP31P51572 246 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 NDST1P52848 882 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 IRF9Q00978 393 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 SQLEQ14534 574 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 STXBP2Q15833 593 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 GOLGA7BQ2TAP0 167 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 TMEM198Q66K66 360 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 HACD2Q6Y1H2 254 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 TMEM135Q86UB9 458 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 TRIM50Q86XT4 487 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 SIX6OS1Q8N1H7 587 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 RNF149Q8NC42 400 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 CENPIQ92674 756 aaPredicted RBP12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 ABHD8Q96I13 439 aa12.57□□□□□ -0.4
CHMP2B-201ENST00000263780 PIWIL1Q96J94 861 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms